Homologs in group_2820

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09640 FBDBKF_09640 80.5 Morganella morganii S1 - hypothetical protein
EHELCC_04440 EHELCC_04440 80.5 Morganella morganii S2 - hypothetical protein
NLDBIP_04440 NLDBIP_04440 80.5 Morganella morganii S4 - hypothetical protein
LHKJJB_14190 LHKJJB_14190 80.5 Morganella morganii S3 - hypothetical protein
HKOGLL_12345 HKOGLL_12345 80.5 Morganella morganii S5 - hypothetical protein

Distribution of the homologs in the orthogroup group_2820

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2820

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00700
Feature type CDS
Gene -
Product hypothetical protein
Location 145894 - 146250 (strand: 1)
Length 357 (nucleotides) / 118 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2820
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Protein Sequence

MKKALLVLLLGIFTGGQALAANQVMCYTYLKKVKDVEIESLKVWCLGTTDGSQGGMKIPELLNMGYNVVSMQNFPYEYSEGGYTYDGAKLLLILEDTKFPNQDPAAKKPANWKFDKYK

Flanking regions ( +/- flanking 50bp)

GCTAACTATATTCTCATAAAATGGAATTATCACTGAATCAGAGGGATTAAATGAAAAAAGCGCTTCTTGTTTTATTACTGGGTATTTTTACCGGCGGTCAGGCGCTGGCAGCGAATCAGGTCATGTGTTACACCTATCTGAAAAAAGTGAAAGATGTTGAAATCGAAAGCTTAAAAGTCTGGTGTCTCGGCACAACAGACGGGTCACAGGGCGGGATGAAAATACCTGAACTGCTGAATATGGGCTATAACGTGGTTTCAATGCAGAATTTCCCGTATGAATATTCCGAAGGTGGCTATACCTATGACGGCGCAAAACTTCTGTTGATCCTTGAGGATACTAAATTCCCGAATCAGGACCCGGCTGCGAAGAAACCGGCAAACTGGAAGTTTGATAAATATAAATAACGGAATTGTCAGTTATTGAATGAACATAAAATAATAACGCCTTCAGTCAG