Homologs in group_1498

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09670 FBDBKF_09670 89.3 Morganella morganii S1 modE molybdenum-dependent transcriptional regulator
EHELCC_04470 EHELCC_04470 89.3 Morganella morganii S2 modE molybdenum-dependent transcriptional regulator
NLDBIP_04470 NLDBIP_04470 89.3 Morganella morganii S4 modE molybdenum-dependent transcriptional regulator
LHKJJB_14160 LHKJJB_14160 89.3 Morganella morganii S3 modE molybdenum-dependent transcriptional regulator
HKOGLL_12375 HKOGLL_12375 89.3 Morganella morganii S5 modE molybdenum-dependent transcriptional regulator
PMI_RS02935 PMI_RS02935 72.4 Proteus mirabilis HI4320 modE molybdenum-dependent transcriptional regulator

Distribution of the homologs in the orthogroup group_1498

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1498

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P58497 1.91e-124 357 71 0 260 3 modE Transcriptional regulator ModE Yersinia pestis
P0A9H0 4.42e-107 313 68 3 250 3 modE Transcriptional regulator ModE Shigella flexneri
P0A9G8 4.42e-107 313 68 3 250 1 modE DNA-binding transcriptional dual regulator ModE Escherichia coli (strain K12)
P0A9G9 4.42e-107 313 68 3 250 3 modE Transcriptional regulator ModE Escherichia coli O157:H7
P45324 1.26e-59 192 44 3 259 3 modE Transcriptional regulator ModE Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P37733 1.63e-37 135 35 3 245 3 modE Molybdenum transport protein ModE Azotobacter vinelandii
Q08385 2.88e-32 122 34 3 243 1 mopA Molybdenum-pterin-binding protein MopA Rhodobacter capsulatus
Q9F4K4 1.35e-26 107 34 4 247 3 modE Molybdenum transport protein ModE Herbaspirillum seropedicae
Q08386 5.93e-21 92 33 5 242 1 mopB Molybdenum-pterin-binding protein MopB Rhodobacter capsulatus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00670
Feature type CDS
Gene modE
Product molybdenum-dependent transcriptional regulator
Location 140895 - 141680 (strand: -1)
Length 786 (nucleotides) / 261 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1498
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF03459 TOBE domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3585 Coenzyme transport and metabolism (H) H Molybdopterin-binding protein MopI

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02019 molybdate transport system regulatory protein - -

Protein Sequence

MDILLTLKLQGNLFADPRRISLLKQVRATGSISQGAKLAGISYKSAWDAINEMNQLSEETIVDRATGGKGGGGATLTRYGERLLQLYDLLAQIQQKAFDVLKEDNLPLDSLLAAISRFSLQTSARNQFFGTIISRNHSHVQQHVNVLLADKKTELAVALTEQSANRLGLSVGKEVLTLIKAPWVKISKSGDISAEFDNQLTGKIDSIAHGADNSEIMVTLTGGAQLCSTLDNPQVSLQQLNVGDDVTALFNADQVIIATLC

Flanking regions ( +/- flanking 50bp)

GCCAACGAACCTGCAATTTGAATGAATAAGGGTATACAAGGTAATTTACATTGGATATTTTACTAACACTTAAATTACAGGGTAATTTATTCGCCGATCCACGGCGGATTTCATTACTCAAACAGGTCAGAGCTACCGGCTCCATCAGTCAGGGAGCAAAACTCGCCGGTATCAGCTATAAAAGTGCGTGGGATGCCATCAATGAAATGAATCAGTTATCTGAGGAAACCATTGTTGACCGCGCAACAGGCGGGAAAGGCGGCGGCGGCGCAACACTTACGCGCTATGGTGAGCGCTTACTTCAGTTATACGATCTGCTGGCACAGATCCAGCAAAAAGCCTTTGATGTGCTGAAAGAGGATAATCTCCCTCTCGACAGCCTGCTGGCGGCTATCTCCCGTTTTTCATTACAGACCAGCGCACGCAACCAGTTTTTCGGCACTATTATTTCGCGCAATCACTCTCACGTTCAGCAACATGTCAATGTTCTGCTGGCGGATAAAAAAACGGAGCTGGCAGTTGCACTGACAGAACAGAGTGCCAACCGGCTGGGGCTTTCCGTGGGTAAGGAAGTACTTACACTTATTAAAGCACCGTGGGTAAAAATAAGTAAGTCCGGCGATATCAGTGCGGAGTTTGATAACCAGCTCACCGGCAAAATAGACTCCATTGCCCACGGGGCAGATAACAGTGAAATAATGGTTACACTGACCGGCGGCGCACAACTGTGCTCAACGCTGGATAACCCGCAAGTCAGCCTTCAGCAACTCAATGTCGGTGATGACGTAACCGCCCTGTTTAATGCCGATCAGGTCATTATCGCAACACTTTGCTGATTTTTAAGATAGAAAAGCCGCCTCAGTTAATGGGCGGCTTTTTTGTCAGT