Homologs in group_1536

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09965 FBDBKF_09965 86.5 Morganella morganii S1 ubiF 3-demethoxyubiquinol 3-hydroxylase
EHELCC_04765 EHELCC_04765 86.5 Morganella morganii S2 ubiF 3-demethoxyubiquinol 3-hydroxylase
NLDBIP_04765 NLDBIP_04765 86.5 Morganella morganii S4 ubiF 3-demethoxyubiquinol 3-hydroxylase
LHKJJB_13865 LHKJJB_13865 86.5 Morganella morganii S3 ubiF 3-demethoxyubiquinol 3-hydroxylase
HKOGLL_12670 HKOGLL_12670 86.5 Morganella morganii S5 ubiF 3-demethoxyubiquinol 3-hydroxylase
PMI_RS02210 PMI_RS02210 59.5 Proteus mirabilis HI4320 ubiF 3-demethoxyubiquinol 3-hydroxylase

Distribution of the homologs in the orthogroup group_1536

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1536

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75728 3.39e-170 484 62 0 386 1 ubiF 3-demethoxyubiquinol 3-hydroxylase Escherichia coli (strain K12)
P25535 3.32e-74 239 36 3 388 1 ubiI 2-octaprenylphenol hydroxylase Escherichia coli (strain K12)
Q2RMZ4 9.35e-59 200 35 4 373 1 ubiL Ubiquinone hydroxylase UbiL Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1)
P72835 3.57e-56 192 34 6 390 3 slr1300 Uncharacterized protein slr1300 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q6DF46 9.22e-56 193 31 10 440 2 coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Xenopus tropicalis
F1RAX8 7.09e-52 183 29 10 432 2 coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Danio rerio
Q68FU7 1.82e-51 182 30 6 382 2 Coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Rattus norvegicus
Q8R1S0 5.69e-51 181 30 6 382 1 Coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Mus musculus
Q2KIL4 3.66e-49 176 30 7 382 2 COQ6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Bos taurus
O01884 7.95e-48 171 27 10 448 3 coq-6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Caenorhabditis elegans
Q9Y2Z9 7.96e-48 172 30 6 382 1 COQ6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Homo sapiens
P25534 1.62e-43 159 30 6 392 1 ubiH 2-octaprenyl-6-methoxyphenol hydroxylase Escherichia coli (strain K12)
Q54EN1 2.09e-43 160 25 9 445 3 coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Dictyostelium discoideum
Q9VMQ5 2.63e-39 149 26 5 379 2 Coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Drosophila melanogaster
Q9Y7Z9 5.97e-35 137 25 11 439 3 coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A1KVW0 1.26e-31 128 25 6 394 1 ubiM Ubiquinone hydroxylase UbiM Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18)
P53318 8.28e-28 117 29 4 289 1 COQ6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A5FMP6 4.12e-13 73 24 17 376 3 kmo Kynurenine 3-monooxygenase Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101)
Q3S8R0 2.34e-12 71 25 10 355 1 oxyE 6-methylpretetramide 4-monooxygenase Streptomyces rimosus
Q5WY16 2.72e-12 71 24 14 384 3 kmo Kynurenine 3-monooxygenase Legionella pneumophila (strain Lens)
F2R776 7.82e-12 70 26 14 386 1 rox Rifampicin monooxygenase Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
A5IG23 4.19e-11 67 25 15 385 3 kmo Kynurenine 3-monooxygenase Legionella pneumophila (strain Corby)
A6H1P4 1.98e-10 65 26 22 387 3 kmo Kynurenine 3-monooxygenase Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86)
Q11PP7 8.96e-10 63 25 21 371 1 kmo Kynurenine 3-monooxygenase Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465)
Q6C9M8 1.24e-09 63 23 16 381 3 BNA4 Kynurenine 3-monooxygenase Yarrowia lipolytica (strain CLIB 122 / E 150)
A5UNX8 2.85e-09 62 23 13 351 3 Msm_1701 Digeranylgeranylglycerophospholipid reductase Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS)
A0M4X2 1.28e-08 60 22 19 381 3 kmo Kynurenine 3-monooxygenase Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803)
Q1BGA7 1.82e-08 59 27 4 238 3 mhpA 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase Burkholderia orbicola (strain AU 1054)
A0KE38 1.82e-08 59 27 4 238 3 mhpA 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase Burkholderia cenocepacia (strain HI2424)
A4JQH4 4.35e-08 58 23 9 395 3 mhpA2 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase 2 Burkholderia vietnamiensis (strain G4 / LMG 22486)
A0A084B9Z5 8.33e-08 57 25 17 367 3 SAT7 FAD-dependent monooxygenase SAT7 Stachybotrys chartarum (strain CBS 109288 / IBT 7711)
Q54RE8 1.09e-07 57 25 16 371 3 kmo Kynurenine 3-monooxygenase Dictyostelium discoideum
A2QMH1 5.16e-07 55 22 12 387 3 bna4-2 Kynurenine 3-monooxygenase 2 Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
Q8TQQ6 8.26e-07 54 23 10 310 1 MA_1484 Digeranylgeranylglycerophospholipid reductase Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Q5YTV5 1.32e-06 53 25 12 350 1 rox Rifampicin monooxygenase Nocardia farcinica (strain IFM 10152)
A4XD40 2.82e-06 52 25 14 335 3 kmo Kynurenine 3-monooxygenase Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / JCM 13857 / NBRC 105044 / CNB-440)
P42535 8.09e-06 51 28 4 162 1 pcpB Pentachlorophenol 4-monooxygenase Sphingobium chlorophenolicum
Q8TUV8 8.7e-06 51 24 11 342 3 MK1645 Digeranylgeranylglycerophospholipid reductase 2 Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
Q8NR94 1.34e-05 50 24 16 367 1 Cgl1158 NADPH-dependent resorcinol 4-hydroxylase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
A8LVF4 2.26e-05 50 23 13 326 3 kmo Kynurenine 3-monooxygenase Salinispora arenicola (strain CNS-205)
F8G0M4 2.83e-05 49 26 13 349 1 hspB 6-hydroxy-3-succinoylpyridine 3-monooxygenase HspB Pseudomonas putida (strain DSM 28022 / S16)
A2Q9N7 3.46e-05 49 39 1 58 3 bna4-1 Kynurenine 3-monooxygenase 1 Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
K7QRJ5 8.89e-05 48 25 16 355 1 pyrE3 Dialkyldecalin synthase Streptomyces rugosporus
P95598 0.000205 47 26 7 217 1 iri Rifampicin monooxygenase Rhodococcus hoagii
Q05355 0.00029 46 26 6 201 3 schC Putative polyketide hydroxylase Streptomyces halstedii
P9WEQ4 0.000494 45 25 7 172 3 olcE FAD-dependent monooxygenase olcE Penicillium canescens
Q7S3C9 0.00055 45 38 0 57 3 nic-3 Kynurenine 3-monooxygenase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q4P0N0 0.000618 45 39 3 66 3 BNA4 Kynurenine 3-monooxygenase Ustilago maydis (strain 521 / FGSC 9021)
Q2NFF7 0.000682 45 21 8 212 3 Msp_1062 Digeranylgeranylglycerophospholipid reductase 2 Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)
B6HN76 0.000824 45 25 13 362 3 sorC FAD-dependent monooxygenase sorC Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00380
Feature type CDS
Gene ubiF
Product 3-demethoxyubiquinol 3-hydroxylase
Location 86116 - 87297 (strand: 1)
Length 1182 (nucleotides) / 393 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1536
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01494 FAD binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0654 Coenzyme transport and metabolism (H)
Energy production and conversion (C)		 HC 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Kegg Ortholog Annotation(s)

Protein Sequence

MDNPITHSEVTVVGGGMIGAACALGLAEAGFRVTVAEQQAPAPFDAQARPDVRISAVSRASVELLASLGVWDAVRAMRCVPYRALETYETPGSEVTFTAESLGLPELGYMVENRILQLALWEKVTAHERITCLCPAQLQTMTKQAGEWLLTFDSGEQISSRLVIGADGARSQVRTLTGIGSCGWQYRQSCMLISVDTHRAQQDLTWQQFFPSGPRAFLPLFDSYASLVWYDSPARIRQLSKLPMAQLQDEIRTVFPARLGEVTPLAAGSFPLVRHHAAHYVQDGVALIGDAAHTINPLAGQGVNLGYRDVDALLDVLINARACCEDWSSTEVLKRYEHRRRPDNLLMQAGMDAFYLAFSNTLPGLQPLRNLALTVAQRATPLKKLALKYALGV

Flanking regions ( +/- flanking 50bp)

TGAATTTACGGCAATTGAACAAAAAATCAACGTATTAAAGTAGGTATGTCATGGATAACCCGATAACACATTCTGAAGTCACCGTCGTCGGCGGAGGTATGATTGGTGCCGCCTGCGCCCTGGGACTGGCTGAGGCCGGTTTTCGTGTCACAGTTGCCGAGCAGCAGGCTCCCGCACCTTTCGACGCACAGGCGCGTCCTGATGTACGAATTTCCGCGGTCAGCCGGGCATCAGTGGAATTACTGGCCTCGCTTGGCGTGTGGGATGCTGTCCGCGCAATGCGCTGTGTGCCGTACCGGGCACTGGAAACCTATGAAACGCCGGGGTCTGAAGTCACTTTTACCGCTGAGAGCCTCGGGTTACCCGAACTGGGGTATATGGTGGAAAACCGGATATTGCAACTGGCGCTGTGGGAGAAAGTCACCGCGCATGAGCGCATCACCTGCCTGTGTCCGGCGCAGTTACAGACAATGACAAAGCAGGCTGGTGAATGGCTGCTGACGTTTGATAGCGGGGAGCAGATCAGCAGCCGCCTGGTGATTGGAGCCGATGGTGCGCGCTCGCAGGTCAGAACACTGACCGGTATCGGCAGCTGTGGCTGGCAGTACCGTCAGTCCTGTATGCTGATTTCAGTCGATACTCACAGGGCGCAACAGGATCTCACCTGGCAGCAGTTTTTCCCGTCGGGTCCGCGCGCATTTCTGCCACTGTTTGATTCATATGCGTCACTGGTCTGGTATGACTCACCTGCCCGCATCCGCCAGCTCAGTAAGTTGCCGATGGCACAGTTGCAGGATGAGATCCGCACGGTATTCCCTGCACGTCTGGGGGAGGTTACACCTCTGGCTGCCGGTTCGTTTCCGCTGGTGCGCCACCATGCCGCGCATTATGTTCAGGATGGTGTTGCACTGATTGGTGATGCGGCACATACCATTAATCCGCTTGCCGGGCAGGGGGTGAACCTCGGATACCGGGATGTGGATGCGTTGCTGGATGTATTAATTAATGCGCGGGCGTGTTGTGAGGACTGGAGCAGCACTGAGGTGCTGAAACGCTATGAGCATCGTCGCCGTCCGGATAACCTGCTGATGCAGGCGGGGATGGATGCATTCTATCTGGCGTTCAGTAATACGCTGCCGGGATTGCAGCCGTTGCGTAATCTGGCACTGACAGTGGCGCAACGCGCTACGCCGCTGAAAAAGCTGGCACTGAAGTATGCGCTGGGGGTTTGAGTACCGGATGCAGGCAGGACCGGAGGCTTTCTTTTGCTCCCGGGATCGCC