Homologs in group_1623

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10210 FBDBKF_10210 85.6 Morganella morganii S1 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase
EHELCC_05010 EHELCC_05010 85.6 Morganella morganii S2 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase
NLDBIP_05010 NLDBIP_05010 85.6 Morganella morganii S4 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase
LHKJJB_13620 LHKJJB_13620 85.6 Morganella morganii S3 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase
HKOGLL_12915 HKOGLL_12915 85.6 Morganella morganii S5 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase
PMI_RS01955 PMI_RS01955 71.6 Proteus mirabilis HI4320 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase

Distribution of the homologs in the orthogroup group_1623

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1623

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23830 0.0 578 62 1 432 1 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase Escherichia coli (strain K12)
P44704 2.13e-163 471 51 3 451 1 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9HDW1 3.94e-18 90 22 19 508 3 pgs1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P79001 3.04e-17 87 24 17 433 3 PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Saccharomyces pastorianus
P25578 3.99e-17 87 23 17 439 1 PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q7KWX2 4.12e-17 87 23 15 436 3 pgs1 Probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Dictyostelium discoideum
Q5ZHN9 5.36e-10 65 21 17 441 2 PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial Gallus gallus
Q32NB8 1.12e-08 60 22 16 436 1 PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial Homo sapiens
Q2KJ28 1.38e-08 60 21 16 435 2 PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial Bos taurus
Q5R8K7 3.92e-08 59 22 17 436 2 PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial Pongo abelii
Q8BHF7 1.89e-07 57 21 16 437 1 Pgs1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial Mus musculus
Q9Z2Z7 3.46e-07 56 21 15 437 1 PGS1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial Cricetulus griseus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00120
Feature type CDS
Gene pssA
Product CDP-diacylglycerol--serine O-phosphatidyltransferase
Location 31198 - 32556 (strand: -1)
Length 1359 (nucleotides) / 452 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1623
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00614 Phospholipase D Active site motif
PF13091 PLD-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1502 Lipid transport and metabolism (I) I Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MLSKFKSAKHQQQLALLPKLPQSVTDVETLFHTSDFRGRLLKEIAGAKKSIYIPALYVEHDDAGRDFLDALYAAKQANPDLDIKVFVDWHRAQRGRIGAAANATNADWYHSLAKTHPDLTVPIFGVPVNTREALGVLHLKGFIIDDTVIYSGASINDVYLYRHDKYRYDRYHFLRNPALAATMKQFIDETLLSDAAVQKLDTETRVRTPEIKNQIREFRLGLRNAAYRLTAPAAGAEQLAVTPLIGLGKKNMLNNTIEHLMCATQEKLVICTPYFNLPSTLVRIISRLLRDGKQVEIIIGDKTANDFYIPPEEPFKIIGGLPYLYEINLRRFMQRLQRFIDSQQLTVRLWKDSDNTYHLKGIWVDNNWQLITGNNLNPRAWGLDLENAILIHDPKQELQSQRQEELTNIRTNTMVINSFRDLDIISDYPVKIKKLLRRLRRIRLDRLISRIL

Flanking regions ( +/- flanking 50bp)

AGAGTATTTCGTAACCGCCGCCTATAACTAAAGAGATTACCCGCACTGTGATGTTGTCAAAATTCAAATCCGCGAAACACCAACAGCAGCTTGCACTACTGCCGAAGTTGCCACAGTCAGTGACTGATGTTGAGACGCTGTTTCACACGAGCGACTTCAGAGGGCGTCTGTTAAAAGAAATCGCCGGTGCAAAGAAATCCATCTATATCCCTGCGTTATATGTCGAACATGATGATGCGGGCCGGGATTTTCTTGATGCACTTTATGCCGCCAAACAGGCGAATCCTGACTTAGATATTAAGGTATTTGTTGACTGGCACCGCGCACAGCGCGGACGCATCGGTGCGGCTGCAAATGCCACTAATGCAGACTGGTATCACTCACTGGCAAAAACGCACCCTGACCTCACTGTCCCGATTTTCGGTGTTCCGGTCAATACCCGCGAAGCCCTGGGTGTACTGCATCTGAAAGGCTTTATTATTGATGACACCGTCATCTACAGCGGTGCCAGCATCAATGACGTTTATCTGTACCGTCATGATAAATACCGCTATGACCGCTATCACTTCCTGCGCAACCCGGCGCTGGCTGCCACCATGAAGCAGTTTATAGATGAAACACTGCTTTCTGACGCTGCGGTACAAAAACTGGATACCGAAACCCGTGTGCGGACGCCGGAAATTAAAAATCAGATCCGTGAATTCCGCCTGGGATTGCGCAATGCCGCATACCGGCTTACCGCACCTGCTGCCGGTGCTGAACAACTGGCTGTTACACCACTGATTGGTCTGGGCAAGAAAAATATGCTCAATAACACCATTGAGCATCTGATGTGTGCAACACAGGAAAAACTGGTTATCTGCACACCTTATTTTAATCTGCCGTCAACGCTGGTACGTATTATCAGCCGCCTGCTGCGCGACGGGAAACAGGTCGAAATTATTATCGGTGATAAAACGGCAAACGATTTCTATATCCCGCCGGAAGAACCATTTAAAATTATCGGCGGGCTGCCTTACCTGTATGAAATAAATCTTCGCCGCTTTATGCAACGGTTACAACGGTTTATTGACAGTCAGCAGTTAACTGTCCGCCTGTGGAAAGACAGCGACAATACTTATCACCTGAAAGGAATATGGGTGGATAATAACTGGCAACTGATAACCGGAAACAATCTGAACCCGAGAGCCTGGGGATTGGATCTGGAAAATGCAATTTTGATTCATGATCCTAAACAGGAACTGCAATCTCAGCGTCAGGAAGAGTTAACCAATATCCGCACGAACACCATGGTTATCAACAGCTTCCGTGATCTGGACATTATCAGTGACTATCCGGTTAAGATCAAAAAACTGTTACGGCGCCTGCGCCGCATCCGGTTGGATCGCCTGATCAGCCGAATTTTATAATGTTTTCCAATCCCGGCACTGTCCGGGATTTTTTTGCGGATTTAACAGGG