Homologs in group_3969

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3969

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3969

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00105
Feature type CDS
Gene -
Product DUF2285 domain-containing protein
Location 26207 - 26920 (strand: 1)
Length 714 (nucleotides) / 237 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3969
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF10074 T6SS, Transcription factor, DNA binding domain
PF20109 Proteobacterial transcriptional regulator-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5419 Function unknown (S) S Uncharacterized conserved protein, DUF2285 domain

Protein Sequence

MNVMGCTDIAWEFLRRNPDYIADWKKYCDEMEPNYDNDPDRQSIADKNAEIRWGLIKYVDPNCMAADYVFWSEKLSKRSFRVLLSHEGDLSVGKILKRKRTNHRGITLNNGTYCIKVFNDYNYFQLFIGSEEDPESILNRYIYISLDLNRKNQNTDIIRDVLSDSVAGSNLSEDIQQLLRMMDSLNQGCSQREIASSLFGQETVDNEWSSDSWLRSNIRYRIKKVNDLIQQGYLNYI

Flanking regions ( +/- flanking 50bp)

TTATAATTATTTTTATATTAAGATAGAGTCAGGTTGACAGAGGTGTTGTTATGAATGTTATGGGATGCACTGATATTGCCTGGGAATTTCTGAGACGAAATCCTGATTACATTGCTGACTGGAAAAAATATTGTGATGAGATGGAGCCAAACTATGACAATGATCCGGACAGACAAAGTATTGCTGATAAAAATGCAGAAATACGCTGGGGATTGATTAAGTATGTCGATCCGAATTGTATGGCTGCTGACTATGTTTTTTGGTCAGAGAAACTGAGTAAACGTTCCTTCAGAGTATTATTAAGTCATGAAGGTGATTTATCCGTTGGTAAAATATTAAAACGTAAAAGAACAAATCACAGAGGTATTACTTTAAATAATGGTACTTACTGTATTAAAGTTTTTAATGACTATAACTATTTTCAGTTATTTATCGGATCTGAAGAGGACCCTGAAAGTATTCTGAACAGATATATCTATATATCTCTTGATCTTAACAGAAAAAATCAAAATACCGATATCATCAGGGACGTTCTGAGCGACAGCGTGGCGGGCTCAAACTTGTCAGAGGATATTCAACAGTTACTCAGAATGATGGACAGCCTGAATCAGGGATGTAGTCAGCGTGAGATTGCATCCAGTCTGTTTGGTCAGGAAACTGTTGATAATGAATGGTCATCAGACAGTTGGCTTCGTTCAAATATCCGCTACCGGATCAAAAAGGTGAATGACCTTATTCAGCAGGGTTATCTTAATTATATCTGACTGAAAAATACGTTTAGCTAATCAGATGATGCTGCTGCAAAAAAAAGCTG