Homologs in group_3799

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS00060 F4V73_RS00060 30.8 Morganella psychrotolerans - pentapeptide repeat-containing protein

Distribution of the homologs in the orthogroup group_3799

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3799

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q52118 1.88e-16 82 26 6 262 4 None Uncharacterized protein in mobD 3'region Pantoea stewartii subsp. stewartii
Q55837 5.9e-07 52 32 0 99 4 slr0516 Uncharacterized protein slr0516 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q55837 6.4e-06 49 31 2 123 4 slr0516 Uncharacterized protein slr0516 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q55837 0.000708 43 25 2 132 4 slr0516 Uncharacterized protein slr0516 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P73709 8.17e-07 53 21 5 274 4 slr1819 Uncharacterized protein slr1819 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P73063 4.7e-05 46 34 1 106 4 slr1851 Uncharacterized protein slr1851 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
I6YBX3 5.72e-05 47 25 2 140 1 mfpA Pentapeptide repeat protein MfpA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
A0QSY0 0.000164 45 22 1 148 1 mfpA Pentapeptide repeat protein MfpA Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
P74221 0.000224 46 30 0 112 4 slr1152 Uncharacterized protein slr1152 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P74221 0.000517 45 29 3 141 4 slr1152 Uncharacterized protein slr1152 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q7L273 0.000645 45 25 2 131 1 KCTD9 BTB/POZ domain-containing protein KCTD9 Homo sapiens
P32704 0.000755 45 22 5 263 4 yjcF Uncharacterized protein YjcF Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00055
Feature type CDS
Gene -
Product pentapeptide repeat-containing protein
Location 12872 - 13978 (strand: -1)
Length 1107 (nucleotides) / 368 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3799
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF13599 Pentapeptide repeats (9 copies)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1357 Function unknown (S) S Uncharacterized conserved protein YjbI, contains pentapeptide repeats

Protein Sequence

MMNKTEKHIRSLQPVKSIAGKTISNLQLNNEALSQLHFTDCHFSYLTLDRMQAQQLHFHRCTFSAISLNRSLLNTCTFHECEIDTIMLKESGLLNVSFQQTNLRLLMTENCQAERCLVSACTISDSVWKNVNLSYWSANDCEITGWFMQEGQLQDSNWFGCTIAQFHCTAAAITRLVAGNSTLTDGHFTGNTCDIMVWQECRLNRTDLREINLSSAGFAKSRLEQCRLDGSNLNYAQFNQGTLHDCSLTGAQLTCAQFTDTGLHQCDLSNAILTSANFVRASLNNCMLDDTGLTRTDMRFCQLKNTPLHTALVQKTRLHGAETGLINPGQNTDEPLLTAIDLWYARHQPGIKDTAGFSRSTPGASRYV

Flanking regions ( +/- flanking 50bp)

GCGTCCATCTGCTGCCCCGCCGCTTCCGGCTGACGGCCTGACAGGAGTTCATGATGAACAAAACAGAAAAACACATCAGGTCATTACAGCCCGTAAAATCAATTGCCGGTAAGACGATCAGTAACCTGCAACTGAACAATGAAGCGCTTTCACAACTGCATTTTACTGACTGTCATTTCAGTTACCTGACATTAGACCGGATGCAGGCGCAGCAACTGCACTTTCACCGCTGTACATTTTCAGCTATTTCACTGAACCGGAGTCTGCTCAATACCTGCACATTCCATGAGTGTGAAATTGACACCATTATGCTGAAAGAGAGCGGTCTGCTGAATGTCTCATTTCAACAGACAAACCTGCGGTTACTGATGACAGAAAATTGTCAGGCAGAGCGCTGCCTGGTATCCGCCTGCACCATCAGTGACAGTGTATGGAAAAACGTCAATCTCAGTTACTGGTCAGCAAATGACTGCGAAATTACCGGCTGGTTTATGCAGGAGGGGCAGTTACAGGACAGTAACTGGTTCGGATGCACCATCGCGCAGTTTCATTGTACCGCTGCGGCAATCACCCGTCTGGTTGCAGGTAACAGTACACTCACAGACGGTCATTTTACCGGTAATACCTGTGACATCATGGTCTGGCAGGAATGCCGGCTGAACCGGACTGATCTGCGGGAAATTAATTTATCCTCTGCCGGATTTGCCAAATCCCGTCTGGAGCAGTGCCGTCTGGACGGCAGCAATCTGAATTACGCCCAATTTAATCAGGGGACTCTTCATGATTGTTCACTGACCGGTGCACAACTGACCTGCGCCCAATTTACGGATACCGGATTACATCAGTGCGATTTAAGTAACGCCATCCTGACATCCGCTAATTTTGTCCGCGCCTCACTCAATAACTGCATGCTGGATGATACCGGTCTGACACGGACGGATATGCGTTTCTGTCAGTTGAAAAATACACCTCTGCACACGGCACTTGTGCAAAAAACCCGTCTGCATGGTGCTGAAACCGGATTGATTAATCCGGGACAAAACACAGATGAACCCCTGCTGACCGCTATCGATTTATGGTATGCCCGCCACCAGCCGGGCATAAAAGACACTGCCGGGTTTTCCCGGTCAACACCAGGAGCCAGCCGCTATGTTTGAGACAACACATCATACTGATGCACCGGCCGTATCTGATATCCGCCATTTTC