Homologs in group_3966

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3966

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3966

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00020
Feature type CDS
Gene -
Product DUF6277 family protein
Location 4559 - 4912 (strand: -1)
Length 354 (nucleotides) / 117 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3966
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF19793 Family of unknown function (DUF6277)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG041089 DUF6277 family protein VF1036 Effector delivery system

Protein Sequence

MLDPKNLQSVLNFSTESGNDATSELQKPFMEGIEKMSMSGSDASRSILKNVNQSCSQMMQEMSKMFDGLQDNIDAHQKMQQAERPKDFDTAMKDLRTSLSSGFPEEMKAMFDKLPKI

Flanking regions ( +/- flanking 50bp)

AAACAGTTCTCCTGCCCGGGCAATATCTGACAGAGAAAAGGACAACCATTATGTTAGATCCGAAAAACTTACAATCGGTACTGAATTTTAGTACCGAATCAGGAAATGATGCCACATCAGAATTACAAAAACCGTTTATGGAAGGGATTGAAAAAATGAGCATGTCAGGATCAGACGCATCCCGATCCATACTAAAAAATGTTAATCAGTCCTGTAGTCAGATGATGCAGGAAATGAGCAAAATGTTTGACGGGTTACAGGACAATATCGATGCTCATCAAAAAATGCAGCAGGCAGAACGCCCTAAAGATTTTGATACTGCAATGAAAGATTTACGGACATCACTCTCATCCGGCTTCCCGGAAGAAATGAAAGCTATGTTCGATAAGTTACCCAAAATTTAAAACTCACTCAGTCAGAAAACCGGGGAATACCCGGTTTTTTTATGCCAATA