Homologs in group_3793

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20580 FBDBKF_20580 100.0 Morganella morganii S1 blaOXA-1 oxacillin-hydrolyzing class D beta-lactamase OXA-1

Distribution of the homologs in the orthogroup group_3793

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3793

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P13661 0.0 564 100 0 276 1 bla Beta-lactamase OXA-1 Escherichia coli
O07293 1.36e-44 155 32 8 285 1 bla Beta-lactamase OXA-18 Pseudomonas aeruginosa
P0A3M3 1.53e-44 154 32 7 288 3 bla Beta-lactamase OXA-9 Klebsiella pneumoniae
P0A3M4 1.53e-44 154 32 7 288 3 bla Beta-lactamase OXA-9 Klebsiella aerogenes
P54427 7.04e-36 132 33 7 236 1 ybxI Probable beta-lactamase YbxI Bacillus subtilis (strain 168)
P0A0B2 1.95e-31 125 33 6 224 3 mecR1 Methicillin resistance mecR1 protein Staphylococcus epidermidis
P0A0B1 1.95e-31 125 33 6 224 1 mecR1 Methicillin resistance mecR1 protein Staphylococcus aureus
P0A0B0 1.95e-31 125 33 6 224 1 mecR1 Methicillin resistance mecR1 protein Staphylococcus aureus (strain N315)
P0A0A9 1.95e-31 125 33 6 224 3 mecR1 Methicillin resistance mecR1 protein Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HK32 1.95e-31 125 33 6 224 3 mecR1 Methicillin resistance mecR1 protein Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
P12287 2.49e-23 102 31 5 195 1 blaR1 Regulatory protein BlaR1 Bacillus licheniformis
P35695 4.41e-23 98 31 3 182 3 bla Beta-lactamase OXA-7 Escherichia coli
Q00983 2.94e-22 95 29 6 206 3 lcr1 Beta-lactamase LCR-1 Pseudomonas aeruginosa
P14489 5.61e-22 95 32 4 177 1 bla Beta-lactamase OXA-10 Pseudomonas aeruginosa
Q00982 1.09e-21 94 29 6 210 3 bla Beta-lactamase OXA-5 Pseudomonas aeruginosa
P0A1V8 1.11e-21 94 31 5 201 1 bla Beta-lactamase OXA-2 Salmonella typhimurium
P0A1V9 1.11e-21 94 31 5 201 3 bla Beta-lactamase OXA-2 Escherichia coli
Q9R976 1.75e-21 94 31 4 182 3 bla Beta-lactamase OXA-19 Pseudomonas aeruginosa
Q06778 3.78e-21 93 31 4 182 1 bla Beta-lactamase OXA-11 Pseudomonas aeruginosa
P18357 4.7e-21 95 29 6 218 1 blaR1 Regulatory protein BlaR1 Staphylococcus aureus
Q51574 1.32e-20 92 30 5 201 1 bla Beta-lactamase OXA-15 Pseudomonas aeruginosa
B3U538 6.49e-20 90 27 5 202 2 blaOXA-133 Beta-lactamase OXA-133 Acinetobacter radioresistens
O84955 1.2e-19 89 27 6 238 3 bla Beta-lactamase OXA-20 Pseudomonas aeruginosa
Q51429 2.25e-19 88 27 6 220 3 bla Beta-lactamase OXA-3 Pseudomonas aeruginosa

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_19860
Feature type CDS
Gene blaOXA-1
Product oxacillin-hydrolyzing class D beta-lactamase OXA-1
Location 706 - 1536 (strand: -1)
Length 831 (nucleotides) / 276 (amino acids)

Contig

Accession ZDB_261
Length 2443 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3793
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF00905 Penicillin binding protein transpeptidase domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2602 Defense mechanisms (V) V Beta-lactamase class D

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18790 beta-lactamase class D OXA-1 [EC:3.5.2.6] beta-Lactam resistance -

AMR gene Annotation(s)

Gene Description Scope Type Class Subclass HMM
blaOXA-1 oxacillin-hydrolyzing class D beta-lactamase OXA-1 core AMR BETA-LACTAM CEPHALOSPORIN NF000388 

Protein Sequence

MKNTIHINFAIFLIIANIIYSSASASTDISTVASPLFEGTEGCFLLYDASTNAEIAQFNKAKCATQMAPDSTFKIALSLMAFDAEIIDQKTIFKWDKTPKGMEIWNSNHTPKTWMQFSVVWVSQEITQKIGLNKIKNYLKDFDYGNQDFSGDKERNNGLTEAWLESSLKISPEEQIQFLRKIINHNLPVKNSAIENTIENMYLQDLDNSTKLYGKTGAGFTANRTLQNGWFEGFIISKSGHKYVFVSALTGNLGSNLTSSIKAKKNAITILNTLNL

Flanking regions ( +/- flanking 50bp)

ATTAATTGTTAGCCGTTAAAATTAAGCCCTTTACCAAACCAATACTTATTATGAAAAACACAATACATATCAACTTCGCTATTTTTTTAATAATTGCAAATATTATCTACAGCAGCGCCAGTGCATCAACAGATATCTCTACTGTTGCATCTCCATTATTTGAAGGAACTGAAGGTTGTTTTTTACTTTACGATGCATCCACAAACGCTGAAATTGCTCAATTCAATAAAGCAAAGTGTGCAACGCAAATGGCACCAGATTCAACTTTCAAGATCGCATTATCACTTATGGCATTTGATGCGGAAATAATAGATCAGAAAACCATATTCAAATGGGATAAAACCCCCAAAGGAATGGAGATCTGGAACAGCAATCATACACCAAAGACGTGGATGCAATTTTCTGTTGTTTGGGTTTCGCAAGAAATAACCCAAAAAATTGGATTAAATAAAATCAAGAATTATCTCAAAGATTTTGATTATGGAAATCAAGACTTCTCTGGAGATAAAGAAAGAAACAACGGATTAACAGAAGCATGGCTCGAAAGTAGCTTAAAAATTTCACCAGAAGAACAAATTCAATTCCTGCGTAAAATTATTAATCACAATCTCCCAGTTAAAAACTCAGCCATAGAAAACACCATAGAGAACATGTATCTACAAGATCTGGATAATAGTACAAAACTGTATGGGAAAACTGGTGCAGGATTCACAGCAAATAGAACCTTACAAAACGGATGGTTTGAAGGGTTTATTATAAGCAAATCAGGACATAAATATGTTTTTGTGTCCGCACTTACAGGAAACTTGGGGTCGAATTTAACATCAAGCATAAAAGCCAAGAAAAATGCGATCACCATTCTAAACACACTAAATTTATAAAAAATCTAATGGCAAAATCGCCCAACCCTTCAATCAAGTCGGGACGGCCA