Homologs in group_3054

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18225 FBDBKF_18225 100.0 Morganella morganii S1 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
NLDBIP_18185 NLDBIP_18185 100.0 Morganella morganii S4 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_18380 LHKJJB_18380 100.0 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_18115 HKOGLL_18115 100.0 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
F4V73_RS01755 F4V73_RS01755 86.7 Morganella psychrotolerans - DMT family transporter

Distribution of the homologs in the orthogroup group_3054

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3054

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O34416 1.12e-13 72 26 6 241 3 yoaV Uncharacterized transporter YoaV Bacillus subtilis (strain 168)
O29973 5.8e-10 61 25 5 232 3 AF_0266 Uncharacterized transporter AF_0266 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P0ABT8 1.94e-09 60 27 8 255 1 yijE Probable cystine transporter YijE Escherichia coli (strain K12)
P0ABT9 1.94e-09 60 27 8 255 3 yijE Probable cystine transporter YijE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA70 7.67e-06 49 26 4 197 1 yedA Uncharacterized inner membrane transporter YedA Escherichia coli (strain K12)
P0AA71 7.67e-06 49 26 4 197 3 yedA Uncharacterized inner membrane transporter YedA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA72 7.67e-06 49 26 4 197 3 yedA Uncharacterized inner membrane transporter YedA Escherichia coli O157:H7
P96680 8.73e-06 49 25 4 211 3 ydfC Uncharacterized transporter YdfC Bacillus subtilis (strain 168)
Q07835 9.29e-05 46 23 6 197 3 yxxF Uncharacterized transporter YxxF Bacillus subtilis (strain 168)
O28720 0.000324 44 27 5 176 3 AF_1552 Uncharacterized transporter AF_1552 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q08794 0.000676 43 25 4 220 3 ycxC Uncharacterized transporter YcxC Bacillus subtilis (strain 168)
P37511 0.000776 43 26 8 217 3 yyaM Uncharacterized transporter YyaM Bacillus subtilis (strain 168)
Q9KKU0 0.000784 43 24 8 181 1 ribN Riboflavin transporter Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P96661 0.001 43 29 1 139 3 ydeD Uncharacterized transporter YdeD Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_18260
Feature type CDS
Gene rhaT
Product Permease of the drug/metabolite transporter (DMT) superfamily
Location 11261 - 12028 (strand: 1)
Length 768 (nucleotides) / 255 (amino acids)
In genomic island -

Contig

Accession ZDB_236
Length 34990 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3054
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00892 EamA-like transporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0697 Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 GER Permease of the drug/metabolite transporter (DMT) superfamily

Protein Sequence

MAWMQKAVRREHLKYTGHFLVMALLATVIYYWAFASGTSLLLSGVSGVLSGAIPLFSFIVAAIFLRQEKITVMRLCGLMLGFAGVILIAKPWQVSGESISLAGVGYMILGSLSVGISFVYAKKFLADKQIAPLALTTYQIGLALVILACITPFTGITAIAQDSTASLGLIIGLGLLGTGVAYLTYYYLILNLGAVVASSVTYIPPVVALIVGFLAANEQLGVTEILSMVLIMSGVFLLQRPSRRPEAEKEAEAVQ

Flanking regions ( +/- flanking 50bp)

TACAGATTGTATTTCTGCGGGTGTTATGCGGCTTTGTGCCGATTGCGGTGATGGCGTGGATGCAGAAAGCGGTGCGCCGTGAGCACCTGAAATACACCGGACATTTCCTGGTGATGGCGCTTCTGGCCACAGTGATTTATTACTGGGCGTTTGCTTCCGGCACCTCATTACTGCTCTCCGGGGTCTCCGGTGTGCTCAGCGGGGCAATTCCGCTGTTCTCGTTTATTGTCGCGGCGATTTTTCTGCGTCAGGAAAAAATCACGGTAATGCGTCTGTGCGGGCTGATGCTCGGCTTTGCCGGAGTGATTCTGATCGCCAAGCCGTGGCAGGTCAGCGGGGAGAGTATCAGTCTCGCCGGGGTGGGTTATATGATTCTGGGATCACTGAGTGTGGGGATTTCCTTTGTGTATGCCAAAAAATTCCTTGCGGATAAACAGATTGCTCCGCTGGCGCTGACCACCTATCAGATTGGCCTTGCGTTGGTGATCCTGGCCTGCATCACGCCATTTACCGGCATTACCGCCATTGCGCAGGACAGCACTGCCAGCCTCGGGCTGATTATCGGGCTGGGATTGCTCGGTACCGGGGTGGCGTATCTGACGTATTACTATCTGATCCTGAATCTGGGGGCTGTAGTGGCTTCATCCGTGACCTATATCCCGCCGGTGGTGGCACTGATTGTCGGGTTCCTCGCCGCCAATGAGCAGCTTGGCGTGACAGAGATTCTGTCGATGGTGCTGATTATGAGTGGTGTCTTCTTATTACAGCGTCCTTCGCGCCGCCCGGAAGCGGAGAAGGAAGCTGAAGCTGTGCAGTAATATTCCGGGAAACCAAACCTATCTTTTTATTGTCTGTTCGACTTGAGTTG