Homologs in group_3350

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11350 FBDBKF_11350 100.0 Morganella morganii S1 - Holin
NLDBIP_05195 NLDBIP_05195 100.0 Morganella morganii S4 - Holin
LHKJJB_02075 LHKJJB_02075 100.0 Morganella morganii S3 - Holin
HKOGLL_15455 HKOGLL_15455 100.0 Morganella morganii S5 - Holin

Distribution of the homologs in the orthogroup group_3350

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3350

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_17865
Feature type CDS
Gene -
Product Holin
Location 26694 - 26978 (strand: -1)
Length 285 (nucleotides) / 94 (amino acids)

Contig

Accession ZDB_234
Length 41502 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3350
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF05449 Putative 3TM holin, Phage_holin_3

Protein Sequence

MILPDLWVYTNFFVCGLAAIRLMNYQRNGAQYKFLPSLMAWLLIVAFGSVPLRILTNDYSHADPSEVAINVAGFILVMLAGGNVTKIFRGAKSD

Flanking regions ( +/- flanking 50bp)

ATTAACAAAGTGGTCGGAGCGACTATTGATAAATTCAGAGGGGGTGGAAGATGATCCTCCCGGACTTATGGGTTTACACCAATTTCTTTGTGTGTGGCCTGGCGGCTATCCGGCTGATGAACTACCAGCGCAACGGCGCACAATACAAGTTCTTACCATCACTCATGGCGTGGCTGTTAATCGTGGCCTTTGGCTCAGTACCGCTGCGCATTCTGACAAATGACTATTCCCATGCTGACCCGTCCGAGGTGGCGATAAACGTCGCCGGATTTATTCTGGTGATGCTGGCCGGCGGGAATGTGACGAAAATATTCAGAGGTGCAAAAAGTGACTGAACCAAAATGGATTACTGAAGCCCGGAAAGAGATCGGCGTATCAGAACACA