Homologs in group_3372

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11550 FBDBKF_11550 100.0 Morganella morganii S1 - Topoisomerase II
NLDBIP_18680 NLDBIP_18680 100.0 Morganella morganii S4 - Topoisomerase II
LHKJJB_17910 LHKJJB_17910 100.0 Morganella morganii S3 - Topoisomerase II
HKOGLL_18740 HKOGLL_18740 100.0 Morganella morganii S5 - Topoisomerase II

Distribution of the homologs in the orthogroup group_3372

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3372

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_17470
Feature type CDS
Gene -
Product Topoisomerase II
Location 5248 - 5748 (strand: 1)
Length 501 (nucleotides) / 166 (amino acids)

Contig

Accession ZDB_233
Length 42053 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3372
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MRLQQWATENIKKLLYLAGDDAVINYGKMRLEFLQKALAQDTSGDFCFRVLHPEVSGPPDMKKASAGYRDFIIGNRALLDLVNSAGEGAPVAHYSADEIQSLFSAQIQGSVDKYGDSFLTDDPYVLAEDKLQTCQMEIDLMADVLRAPPRESAELIRYVLADDWPE

Flanking regions ( +/- flanking 50bp)

CCGGAAGAAAATAGTTTATCTGTCACTGATTGCGCTGTTTAGAGTATTATATGCGCCTGCAGCAGTGGGCCACCGAAAATATTAAAAAACTGCTTTATCTCGCGGGGGATGACGCGGTGATTAATTACGGGAAAATGCGGCTGGAATTTTTGCAGAAAGCACTGGCGCAGGATACCTCCGGTGACTTCTGCTTTCGTGTACTGCATCCGGAAGTATCAGGCCCGCCGGATATGAAAAAGGCTTCCGCCGGGTACCGTGACTTTATTATCGGTAACAGAGCGTTGCTGGATCTGGTGAATTCAGCCGGTGAAGGGGCTCCGGTTGCACATTATTCTGCGGATGAAATTCAGTCATTATTTTCGGCACAAATACAGGGGTCGGTGGATAAATACGGCGATAGTTTCCTGACGGATGATCCGTATGTACTGGCGGAAGACAAGCTGCAAACCTGTCAGATGGAAATTGATTTAATGGCGGATGTGCTGAGAGCACCGCCCCGTGAATCCGCAGAATTGATCCGCTATGTGCTTGCGGATGATTGGCCGGAATAAATAAAGCCGGGCTTAATACAGATTAAGCCCGTATCGGGTATTATTACGGA