Homologs in group_147

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9 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12390 FBDBKF_12390 96.9 Morganella morganii S1 - Primosomal protein I
FBDBKF_18710 FBDBKF_18710 100.0 Morganella morganii S1 - Primosomal protein I
EHELCC_19155 EHELCC_19155 98.0 Morganella morganii S2 - Primosomal protein I
NLDBIP_15815 NLDBIP_15815 100.0 Morganella morganii S4 - Primosomal protein I
NLDBIP_19125 NLDBIP_19125 98.0 Morganella morganii S4 - Primosomal protein I
LHKJJB_16025 LHKJJB_16025 100.0 Morganella morganii S3 - Primosomal protein I
LHKJJB_19015 LHKJJB_19015 98.0 Morganella morganii S3 - Primosomal protein I
HKOGLL_15145 HKOGLL_15145 100.0 Morganella morganii S5 - Primosomal protein I
PMI_RS02395 PMI_RS02395 38.1 Proteus mirabilis HI4320 - helix-turn-helix domain-containing protein

Distribution of the homologs in the orthogroup group_147

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_147

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_15285
Feature type CDS
Gene -
Product Primosomal protein I
Location 23894 - 24778 (strand: -1)
Length 885 (nucleotides) / 294 (amino acids)
In genomic island GI24

Contig

Accession ZDB_226
Length 116685 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_147
Orthogroup size 10
N. genomes 6

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Genomic region

Domains

PF13730 Helix-turn-helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4189 Transcription (K) K Predicted transcriptional regulator, ArsR family

Protein Sequence

MSMILTARALQIKTGNALRKLVLVKLADNANDQGESWPSVPYIAEQCEMSERSVQNHINALVEMGLVRIESRKSANGLNQSNIYHLRLNAAVVSGESAAPYGANPAGVSGANGSGTGAADSPGGATGSDSGAGAAPRISHDPVIDPDNKNINPVRGKAKSKIVMPENFAPSPEHTERAKTAGLDVQDEFGKFRDYHASKGTQYADWNAGFNYWLRQAEGFKRAANSKHIDTTECDEVFRKMFSSSNWKPENRVQELVSKHKSHIGRMNEIAGRAAFRGYWKQATEQAAKEREAA

Flanking regions ( +/- flanking 50bp)

CCTCTGAAAACCTTTCAGGAGCGGTATACACGCGTGGATGAGGTGAAACCATGAGCATGATTTTAACTGCGCGGGCTTTGCAGATAAAAACCGGCAATGCGCTGCGCAAACTGGTACTGGTAAAGCTGGCGGATAACGCCAACGACCAGGGCGAGTCGTGGCCGTCTGTGCCGTACATCGCAGAGCAGTGCGAAATGTCAGAGCGTTCAGTGCAGAACCACATTAATGCCTTGGTAGAAATGGGGCTGGTTCGTATCGAATCCCGTAAATCGGCCAACGGTCTGAACCAGTCAAATATCTATCATCTGCGCCTGAATGCAGCCGTTGTGAGTGGTGAATCTGCTGCACCATATGGTGCAAATCCTGCGGGGGTGAGTGGTGCAAATGGTTCCGGGACTGGTGCAGCAGATTCACCAGGTGGTGCAACTGGTTCCGATAGTGGTGCAGGAGCTGCACCCAGAATCAGTCATGATCCAGTCATAGATCCAGATAATAAAAATATTAATCCTGTTCGCGGAAAAGCCAAAAGCAAAATCGTGATGCCGGAAAACTTCGCACCGTCACCAGAACACACTGAACGGGCAAAAACTGCTGGACTGGATGTTCAGGATGAGTTTGGCAAATTCAGGGACTACCACGCCAGCAAGGGCACCCAATACGCTGACTGGAACGCTGGGTTTAATTACTGGCTGAGACAGGCTGAAGGATTTAAACGCGCTGCGAACTCAAAGCACATCGACACCACCGAGTGCGATGAAGTCTTCAGAAAAATGTTCTCATCCTCCAACTGGAAGCCAGAAAACCGCGTGCAGGAACTGGTTTCCAAGCATAAATCACATATTGGCCGGATGAATGAAATTGCTGGACGCGCAGCATTCCGTGGGTACTGGAAACAGGCCACAGAACAGGCCGCAAAAGAACGGGAGGCAGCATGATCATGCGTTCAGAAAGCAAAGAAATTTACGGCGTGAGTGTGGTGCCGGTG