Homologs in group_3569

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18675 FBDBKF_18675 100.0 Morganella morganii S1 - Holin
NLDBIP_15780 NLDBIP_15780 100.0 Morganella morganii S4 - Holin
LHKJJB_16060 LHKJJB_16060 100.0 Morganella morganii S3 - Holin
HKOGLL_15180 HKOGLL_15180 100.0 Morganella morganii S5 - Holin

Distribution of the homologs in the orthogroup group_3569

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3569

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A9R2 8e-25 90 64 0 64 3 essD Prophage lysis protein S homolog EssD Escherichia coli (strain K12)
P0A9R3 8e-25 90 64 0 64 3 essD Lysis protein S homolog from lambdoid prophage DLP12 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P27360 2.59e-24 89 65 0 64 1 S Antiholin Enterobacteria phage P21
P77237 7.18e-24 88 60 0 64 3 essQ Prophage lysis protein S homolog EssQ Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_15250
Feature type CDS
Gene -
Product Holin
Location 19502 - 19723 (strand: -1)
Length 222 (nucleotides) / 73 (amino acids)

Contig

Accession ZDB_226
Length 116685 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3569
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF04971 Bacteriophage P21 holin S

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0501 Posttranslational modification, protein turnover, chaperones (O) O Zn-dependent protease with chaperone function

Protein Sequence

MRMDKITTGISYGTSGAGALYWMKQLLDGFSPEQWAAIGVLGSLLFAFLTFLTNLYFRHREYKRRCKEEPQDE

Flanking regions ( +/- flanking 50bp)

GGCATTTCCCTTTATTCACATTCAAACAGGACACTCCACAGGGGGTGCGTATGCGTATGGACAAAATAACTACCGGCATTTCATACGGCACGTCCGGTGCCGGGGCCTTGTACTGGATGAAGCAGCTGCTGGACGGTTTCTCTCCGGAACAGTGGGCGGCAATCGGCGTGCTGGGCAGCTTACTGTTCGCATTCCTGACCTTCCTGACCAACCTGTATTTCAGGCACCGCGAGTACAAGCGCCGTTGCAAAGAGGAGCCACAGGATGAATAACGGACTGGCTAAAAAAGCGATAGCGTCCGCGAGTGGTGGGGCAATAGCCG