Homologs in group_1275

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07650 FBDBKF_07650 100.0 Morganella morganii S1 nrtR Nudix-related transcriptional regulator NrtR
NLDBIP_13925 NLDBIP_13925 100.0 Morganella morganii S4 nrtR Nudix-related transcriptional regulator NrtR
LHKJJB_08925 LHKJJB_08925 100.0 Morganella morganii S3 nrtR Nudix-related transcriptional regulator NrtR
HKOGLL_08475 HKOGLL_08475 100.0 Morganella morganii S5 nrtR Nudix-related transcriptional regulator NrtR
F4V73_RS13470 F4V73_RS13470 85.4 Morganella psychrotolerans - NUDIX domain-containing protein
PMI_RS11850 PMI_RS11850 78.1 Proteus mirabilis HI4320 - NUDIX domain-containing protein

Distribution of the homologs in the orthogroup group_1275

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1275

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6FDK3 2.9e-71 221 44 0 234 1 ACIAD0962 ADPR responsive transcriptional repressor NtrR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q58549 9.46e-11 62 27 4 137 1 nudF ADP-ribose pyrophosphatase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q55928 0.000893 43 34 3 85 1 slr0787 Bifunctional NMN adenylyltransferase/Nudix hydrolase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_13480
Feature type CDS
Gene nrtR
Product Nudix-related transcriptional regulator NrtR
Location 16801 - 17523 (strand: -1)
Length 723 (nucleotides) / 240 (amino acids)

Contig

Accession ZDB_223
Length 138954 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1275
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00293 NUDIX domain
PF21906 NrtR DNA-binding winged helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4111 Function unknown (S) S Uncharacterized conserved protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03574 8-oxo-dGTP diphosphatase [EC:3.6.1.55] - -

Protein Sequence

MDEQTYLAGYQRRDFLSPLVTVDAVLFTYHNETLHVLLAERAEHPEKGKWGLPGGFVDEAQDKTLEDTVLRKLREKTGVTPPYIEQLCTVGNGQRDKRGWSVTVCYTALIAMQACEKQINTVNSVRWIPLDEAENMTLAFDHQLLIRQARARLRQKSLYSVVPGFALPETFTLPELQHVHEILIGQPIQKKSFRRRLEQADLLIDTGEKRAERGRPAALYRLKPASADYRFIRNLETDEE

Flanking regions ( +/- flanking 50bp)

TTCTCTCCTTACAATAGAATGACTTATCCCGATTTCAGGATGTGACGCAAATGGATGAACAAACTTACCTCGCCGGTTATCAGCGCCGTGATTTTTTGTCGCCCCTGGTGACTGTTGATGCTGTGCTTTTCACTTATCACAATGAAACCCTGCATGTGCTGCTGGCCGAACGTGCGGAACATCCGGAGAAAGGCAAATGGGGATTGCCCGGTGGTTTTGTGGATGAGGCACAGGATAAGACTCTGGAAGATACCGTACTGCGGAAACTGCGGGAAAAAACCGGTGTCACACCGCCGTACATTGAGCAGTTATGTACGGTCGGCAATGGTCAGCGGGACAAACGCGGCTGGTCAGTCACCGTCTGCTATACGGCACTGATTGCCATGCAGGCGTGTGAAAAGCAAATTAACACAGTGAATTCAGTCAGATGGATACCGCTGGATGAAGCAGAGAATATGACATTGGCGTTTGATCACCAGTTACTTATCCGTCAGGCCAGAGCGCGGCTGCGCCAGAAATCCCTCTATTCCGTCGTGCCGGGATTCGCCCTGCCGGAAACCTTTACCCTGCCGGAATTACAGCACGTTCATGAAATTCTGATTGGTCAGCCGATTCAGAAAAAATCATTCCGCCGCCGTCTCGAACAGGCCGATCTGCTGATTGATACCGGTGAAAAACGGGCTGAACGCGGTCGCCCGGCGGCACTGTACCGCCTGAAACCGGCGTCGGCTGATTACCGTTTTATCCGTAATCTGGAAACAGACGAAGAATAAAACCGTGTTCCGCCTGTATTACTTCCTGACGGCTTCTGCTATCGTCAGCA