Homologs in group_2784

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08795 FBDBKF_08795 100.0 Morganella morganii S1 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_13070 NLDBIP_13070 100.0 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_13485 LHKJJB_13485 100.0 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_11545 HKOGLL_11545 100.0 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS19600 F4V73_RS19600 85.6 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator

Distribution of the homologs in the orthogroup group_2784

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2784

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P28815 5.44e-12 65 25 2 163 1 tetC Transposon Tn10 TetC protein Escherichia coli
Q9AIU0 1.1e-07 53 35 2 103 1 ttgR HTH-type transcriptional regulator TtgR Pseudomonas putida (strain DOT-T1E)
Q88N29 2.02e-07 52 35 2 103 3 ttgR Probable HTH-type transcriptional regulator TtgR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q9KJC4 2.02e-07 52 35 2 103 3 arpR Probable HTH-type transcriptional regulator ArpR Pseudomonas putida
Q8NQ97 7.32e-07 50 38 0 54 1 acnR HTH-type transcriptional repressor AcnR Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P39897 1.14e-06 50 37 2 81 1 mtrR HTH-type transcriptional regulator MtrR Neisseria gonorrhoeae
Q8FTA6 1.23e-06 50 38 0 54 3 acnR HTH-type transcriptional repressor AcnR Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
P0C068 1.77e-06 50 34 2 103 3 mepR Probable HTH-type transcriptional regulator MepR Pseudomonas putida
P0ACT2 3.47e-06 49 40 1 60 4 envR Probable acrEF/envCD operon repressor Escherichia coli (strain K12)
P0ACT3 3.47e-06 49 40 1 60 3 envR Probable acrEF/envCD operon repressor Escherichia coli O157:H7
P0ACT9 5.17e-06 48 37 1 62 3 uidR HTH-type transcriptional regulator UidR Shigella flexneri
P0ACT6 5.17e-06 48 37 1 62 1 uidR HTH-type transcriptional regulator UidR Escherichia coli (strain K12)
P0ACT7 5.17e-06 48 37 1 62 3 uidR HTH-type transcriptional regulator UidR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACT8 5.17e-06 48 37 1 62 3 uidR HTH-type transcriptional regulator UidR Escherichia coli O157:H7
Q6NH62 5.32e-06 48 37 0 53 3 acnR HTH-type transcriptional repressor AcnR Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)
Q9R9T9 1.79e-05 47 38 1 73 1 srpR HTH-type transcriptional regulator SrpR Pseudomonas putida
P0ACT1 1.89e-05 47 38 1 60 3 acrR HTH-type transcriptional regulator AcrR Shigella flexneri
P0ACS9 1.89e-05 47 38 1 60 1 acrR HTH-type transcriptional regulator AcrR Escherichia coli (strain K12)
P0ACT0 1.89e-05 47 38 1 60 3 acrR HTH-type transcriptional regulator AcrR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
O31500 2e-05 47 32 0 53 4 yerO Uncharacterized HTH-type transcriptional regulator YerO Bacillus subtilis (strain 168)
Q93PU7 5.18e-05 44 36 1 73 1 ttgW Uncharacterized HTH-type transcriptional regulator TtgW Pseudomonas putida (strain DOT-T1E)
O33453 8.17e-05 45 30 10 212 2 cymR HTH-type transcriptional regulator CymR Pseudomonas putida
B4SHW1 9.38e-05 45 32 0 81 3 betI HTH-type transcriptional regulator BetI Stenotrophomonas maltophilia (strain R551-3)
Q8G2M8 0.000116 44 37 0 53 1 bepR HTH-type transcriptional repressor BepR Brucella suis biovar 1 (strain 1330)
Q88FX7 0.000133 44 28 1 83 2 nicS HTH-type transcriptional repressor NicS Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
O53165 0.000206 43 35 0 53 1 Rv1474c HTH-type transcriptional repressor Rv1474c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P0A0N5 0.000247 43 25 1 81 1 qacR HTH-type transcriptional regulator QacR Staphylococcus haemolyticus
P0A0N4 0.000247 43 25 1 81 1 qacR HTH-type transcriptional regulator QacR Staphylococcus aureus
P0A0N3 0.000247 43 25 1 81 1 qacR HTH-type transcriptional regulator QacR Staphylococcus aureus (strain Mu50 / ATCC 700699)
A9AN01 0.00028 43 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia multivorans (strain ATCC 17616 / 249)
B4EHJ0 0.000294 43 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
Q9RAJ1 0.000294 43 26 5 158 4 dhaR HTH-type transcriptional repressor DhaR Mycobacterium sp. (strain GP1)
Q1BQE0 0.000302 43 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia orbicola (strain AU 1054)
B1K709 0.000302 43 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia orbicola (strain MC0-3)
A0B2F5 0.000302 43 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia cenocepacia (strain HI2424)
Q39A42 0.000308 43 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)
Q0B713 0.000346 43 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia ambifaria (strain ATCC BAA-244 / DSM 16087 / CCUG 44356 / LMG 19182 / AMMD)
B1Z032 0.000346 43 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia ambifaria (strain MC40-6)
Q2T6C8 0.000373 43 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
Q4JVM3 0.000453 42 35 0 54 3 acnR HTH-type transcriptional repressor AcnR Corynebacterium jeikeium (strain K411)
Q63KK9 0.000483 42 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia pseudomallei (strain K96243)
A3NKP7 0.000483 42 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia pseudomallei (strain 668)
Q3JLL9 0.000483 42 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia pseudomallei (strain 1710b)
A3P6A9 0.000483 42 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia pseudomallei (strain 1106a)
A2RWD7 0.000483 42 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia mallei (strain NCTC 10229)
A3MEC5 0.000483 42 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia mallei (strain NCTC 10247)
Q62CH6 0.000512 42 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia mallei (strain ATCC 23344)
A4JJG4 0.000767 42 32 0 67 3 betI HTH-type transcriptional regulator BetI Burkholderia vietnamiensis (strain G4 / LMG 22486)
B2JS87 0.000833 42 31 0 67 3 betI HTH-type transcriptional regulator BetI Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_12730
Feature type CDS
Gene acrR
Product DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
Location 23256 - 23843 (strand: -1)
Length 588 (nucleotides) / 195 (amino acids)

Contig

Accession ZDB_222
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2784
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family
PF21351 Tetracyclin repressor-like, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Protein Sequence

MSHKPRAEMIEETRTKLIRAARQQFGKAGYAATVMDDLTAQAGLTRGALYHHFGDKKGLFLAVLQDLDRELDVRLDTAEKDEADEWSAFKFRCQGYLAMSLEPEVQRIMFRDAASVLDFSILKSHELACVQGITRRLTHLMETGWIKQVAPDVLALFINGGLYECAMWIVHSDDPQATYEKVRVSFDQLLENLRV

Flanking regions ( +/- flanking 50bp)

AAAAAGTGCTATAATCCCCGGCTGAAAGAGCTGACCGCAGGAGTAATGAAATGAGCCACAAGCCACGTGCAGAGATGATAGAAGAAACGCGGACCAAGCTTATCCGTGCTGCACGCCAGCAGTTTGGTAAGGCCGGGTACGCCGCGACGGTGATGGATGATCTGACGGCTCAGGCGGGCCTCACCCGGGGGGCGCTGTATCATCACTTTGGTGATAAAAAAGGGCTGTTTCTGGCGGTGCTGCAGGATCTGGATCGTGAACTCGATGTGCGCCTGGATACCGCAGAAAAAGATGAAGCTGATGAGTGGTCCGCTTTTAAATTCCGCTGCCAGGGCTATCTGGCAATGAGTCTGGAGCCGGAAGTTCAGCGGATTATGTTCCGTGATGCGGCCTCGGTACTGGATTTTTCCATTCTCAAATCCCACGAACTGGCCTGTGTGCAGGGGATCACCCGGCGTCTGACACACCTGATGGAAACCGGATGGATAAAACAGGTGGCACCGGATGTGCTGGCACTGTTTATTAATGGCGGGCTGTATGAATGTGCGATGTGGATTGTGCACAGTGATGATCCGCAGGCCACTTATGAAAAGGTCAGAGTCTCTTTTGATCAGCTTCTGGAAAATTTACGGGTATAAAAAAACCCCGCACCTTGCAGGGTTTTCATTATCACTCTCAGAAAGCGCAG