Homologs in group_3404

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13290 FBDBKF_13290 100.0 Morganella morganii S1 - DNA-binding protein
NLDBIP_09130 NLDBIP_09130 100.0 Morganella morganii S4 - DNA-binding protein
LHKJJB_05135 LHKJJB_05135 100.0 Morganella morganii S3 - DNA-binding protein
HKOGLL_05780 HKOGLL_05780 100.0 Morganella morganii S5 - DNA-binding protein

Distribution of the homologs in the orthogroup group_3404

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3404

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_08805
Feature type CDS
Gene -
Product DNA-binding protein
Location 238144 - 238350 (strand: -1)
Length 207 (nucleotides) / 68 (amino acids)
In genomic island -

Contig

Accession ZDB_217
Length 250991 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3404
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MSDISKQESPWFKTSDLADRYDVKPHTIRVWAGNGKQKREGFPKPKFKSKELIFLKQDIFDWENGKRF

Flanking regions ( +/- flanking 50bp)

GCAGTGGCAAATGCGGTATTGGTGAACGGGTATAAAAAGGAGTGTGAAAAATGAGCGATATCAGCAAACAGGAATCACCGTGGTTTAAAACCAGCGACCTGGCAGATCGGTATGATGTGAAACCTCACACTATCAGGGTTTGGGCAGGCAACGGAAAACAAAAACGCGAAGGTTTCCCGAAGCCAAAATTTAAATCAAAAGAATTAATTTTTCTCAAGCAGGATATTTTTGACTGGGAGAATGGTAAGCGATTTTAGTCAGTTTATCCCACCACTCCTCATACCCTTTTCTTTGCTCATTCAGGTAG