Homologs in group_3440

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14490 FBDBKF_14490 100.0 Morganella morganii S1 - TIR domain-containing protein
NLDBIP_08115 NLDBIP_08115 100.0 Morganella morganii S4 - TIR domain-containing protein
LHKJJB_06150 LHKJJB_06150 100.0 Morganella morganii S3 - TIR domain-containing protein
HKOGLL_04765 HKOGLL_04765 100.0 Morganella morganii S5 - TIR domain-containing protein

Distribution of the homologs in the orthogroup group_3440

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3440

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_07790
Feature type CDS
Gene -
Product TIR domain-containing protein
Location 20937 - 22079 (strand: 1)
Length 1143 (nucleotides) / 380 (amino acids)

Contig

Accession ZDB_217
Length 250991 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3440
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF13676 TIR domain

Protein Sequence

MLPIYQLAVIGSPSDAQLRDLEDAVKTAVAMYGLRLGQEISWEITPDMFTPNQLRSSAVVFFCGVGVDHPSLPSLLRSGTPVIPIVSDLRHVSAEVPELLRPLNCLTYANGGAKRVSIALLECAGLLPKQRRVFVSYRRDEARVAALQMFDALSARHFDVFLDTHSIVPAEDFQTMLWHRLCDSDVLLMLDTPDYFNSRWTSAEFGRALAKGISVLRVAWPETEQSRGLGTASIAELAESELDRGTGRIEDSAIDRICLQLEVVRSKSHAVRIINLVSSLRIGIESIGGEVIGIGVGREIKVRLPTGRIIVVYPTVGVPTSSTMHEASMNYPDESVAILYDHVGLHPQWLNHMDWLGSHIQTAKWVKACEVGWQFADWEV

Flanking regions ( +/- flanking 50bp)

TAAAAAACCACACCATTTGACGATAATTGTAATTGCATACAAGGGTATCCATGCTTCCTATCTATCAGCTTGCTGTTATAGGCTCCCCTTCAGACGCACAACTTCGCGATTTAGAGGACGCGGTTAAAACTGCAGTGGCAATGTACGGGTTACGACTCGGTCAGGAGATTAGTTGGGAAATAACTCCTGATATGTTTACACCAAACCAGTTGCGATCGAGTGCGGTTGTATTTTTTTGCGGGGTAGGAGTGGATCACCCAAGTTTACCGAGCTTGCTCCGCAGCGGCACTCCTGTCATTCCAATTGTATCCGATCTGCGGCATGTATCTGCGGAGGTTCCTGAGCTGCTGCGGCCGCTAAACTGTCTGACCTACGCAAATGGTGGTGCTAAGCGTGTCTCCATAGCTCTTCTTGAATGCGCTGGATTGCTTCCGAAACAACGAAGGGTCTTCGTAAGCTACCGTCGGGATGAGGCCAGGGTTGCCGCGCTCCAGATGTTCGATGCTCTATCAGCACGCCATTTCGACGTATTCCTTGATACTCATAGTATTGTGCCAGCAGAGGATTTTCAGACCATGTTGTGGCATAGACTCTGCGATTCTGACGTGCTGTTGATGTTAGATACTCCTGACTATTTTAATAGTCGTTGGACATCAGCTGAATTTGGGCGAGCTCTCGCGAAAGGTATCAGTGTCCTTCGAGTCGCTTGGCCTGAAACGGAGCAGTCTCGTGGGTTGGGTACTGCAAGCATCGCAGAGTTAGCTGAAAGCGAGTTGGACAGAGGAACAGGACGTATCGAGGATTCCGCTATTGACCGAATTTGTCTTCAGCTTGAGGTTGTACGCAGCAAAAGTCATGCTGTAAGAATTATCAACCTAGTCAGCAGTTTGCGCATTGGAATTGAGTCCATAGGTGGTGAAGTCATTGGTATAGGAGTGGGGAGGGAAATCAAAGTTCGTTTACCTACAGGCCGAATAATAGTTGTCTACCCGACGGTCGGGGTCCCGACATCATCAACCATGCATGAAGCTTCAATGAACTATCCAGATGAATCCGTTGCTATACTGTATGACCATGTGGGGCTGCATCCTCAGTGGTTAAATCATATGGATTGGCTCGGCTCGCATATCCAAACAGCGAAGTGGGTGAAAGCATGCGAGGTCGGCTGGCAGTTTGCGGATTGGGAGGTTTAAAAAGTGGATTCTATTTTTCTCTCAGCAAGCGTCCCAGTCAATGGACGAGG