Homologs in group_11

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19 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00150 FBDBKF_00150 74.6 Morganella morganii S1 - Holin
FBDBKF_12835 FBDBKF_12835 74.6 Morganella morganii S1 - Holin
FBDBKF_13150 FBDBKF_13150 73.0 Morganella morganii S1 - Holin
FBDBKF_19460 FBDBKF_19460 73.0 Morganella morganii S1 - Holin
FBDBKF_19910 FBDBKF_19910 100.0 Morganella morganii S1 - Holin
EHELCC_01395 EHELCC_01395 74.6 Morganella morganii S2 - Holin
EHELCC_19495 EHELCC_19495 73.0 Morganella morganii S2 - Holin
NLDBIP_02065 NLDBIP_02065 74.6 Morganella morganii S4 - Holin
NLDBIP_08030 NLDBIP_08030 100.0 Morganella morganii S4 - Holin
NLDBIP_09270 NLDBIP_09270 73.0 Morganella morganii S4 - Holin
NLDBIP_19055 NLDBIP_19055 74.6 Morganella morganii S4 - Holin
LHKJJB_03580 LHKJJB_03580 74.6 Morganella morganii S3 - Holin
LHKJJB_04995 LHKJJB_04995 73.0 Morganella morganii S3 - Holin
LHKJJB_06235 LHKJJB_06235 100.0 Morganella morganii S3 - Holin
LHKJJB_18945 LHKJJB_18945 74.6 Morganella morganii S3 - Holin
HKOGLL_00010 HKOGLL_00010 74.6 Morganella morganii S5 - Holin
HKOGLL_05920 HKOGLL_05920 73.0 Morganella morganii S5 - Holin
HKOGLL_19090 HKOGLL_19090 100.0 Morganella morganii S5 - Holin
F4V73_RS02055 F4V73_RS02055 69.4 Morganella psychrotolerans - phage holin family protein

Distribution of the homologs in the orthogroup group_11

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_11

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_07705
Feature type CDS
Gene -
Product Holin
Location 10989 - 11183 (strand: 1)
Length 195 (nucleotides) / 64 (amino acids)

Contig

Accession ZDB_217
Length 250991 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_11
Orthogroup size 20
N. genomes 6

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Genomic region

Domains

PF16080 Bacteriophage holin family HP1

Protein Sequence

MSMSDKYSGPAAYTWGLITSVLGVLSLDQWAVLIGIVCTIGTFFINWYYRRKEFQIKAGDHHEE

Flanking regions ( +/- flanking 50bp)

TGAGTTTACCTTTCAATAATATTTACGGAACACTCTGCAAGGGAGTGTATATGAGCATGTCAGATAAATATTCCGGACCCGCAGCATATACCTGGGGGCTTATCACTTCCGTTTTGGGTGTGTTATCGCTGGATCAGTGGGCAGTCCTTATCGGGATTGTCTGCACCATCGGTACATTTTTTATCAATTGGTATTACCGACGGAAAGAGTTTCAGATAAAAGCCGGAGATCACCATGAAGAATAGTCTGAGCAAAAAAGTGATTGCCGCAGCAGCAGGCGGCGCAATTTCTGCCG