Homologs in group_3329

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11175 FBDBKF_11175 100.0 Morganella morganii S1 clpX ATP-dependent Clp protease ATP-binding subunit ClpX
NLDBIP_05370 NLDBIP_05370 100.0 Morganella morganii S4 clpX ATP-dependent Clp protease ATP-binding subunit ClpX
LHKJJB_02250 LHKJJB_02250 100.0 Morganella morganii S3 clpX ATP-dependent Clp protease ATP-binding subunit ClpX
HKOGLL_15630 HKOGLL_15630 100.0 Morganella morganii S5 clpX ATP-dependent Clp protease ATP-binding subunit ClpX

Distribution of the homologs in the orthogroup group_3329

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3329

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_05050
Feature type CDS
Gene clpX
Product ATP-dependent Clp protease ATP-binding subunit ClpX
Location 1346 - 1654 (strand: 1)
Length 309 (nucleotides) / 102 (amino acids)

Contig

Accession ZDB_215
Length 284267 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3329
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MKSEYVMHGQVMKFVSPEPDPKDVCNLCACNVGKNNLIQGQAANICFDCSDLAKQLADEKRKERADKELNELDEILRNMTTCSMPAIARQLYRMGYRKIQEG

Flanking regions ( +/- flanking 50bp)

CGTTTCAGGATGAAGCGTAATGCAGGGATGCTGATAACAGAGGAATGAATATGAAAAGTGAATATGTGATGCACGGCCAAGTGATGAAATTTGTCTCACCAGAACCAGACCCGAAAGATGTCTGTAACCTCTGTGCCTGTAATGTCGGTAAAAATAATTTAATTCAGGGACAGGCAGCAAATATCTGTTTTGACTGCTCAGATTTGGCGAAGCAGTTGGCAGATGAAAAGCGGAAAGAAAGAGCAGATAAAGAATTGAATGAACTTGATGAAATTCTAAGAAATATGACCACCTGCTCAATGCCTGCTATTGCTCGGCAATTATACCGAATGGGATATAGAAAGATTCAGGAGGGGTGATGGATATATCACGACAGCAGTTTGAAGAATACATTAAATTGCATACCGAC