Homologs in group_3268

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07420 FBDBKF_07420 100.0 Morganella morganii S1 yqgA Uncharacterized membrane protein YqgA, affects biofilm formation
NLDBIP_03550 NLDBIP_03550 100.0 Morganella morganii S4 yqgA Uncharacterized membrane protein YqgA, affects biofilm formation
LHKJJB_09380 LHKJJB_09380 100.0 Morganella morganii S3 yqgA Uncharacterized membrane protein YqgA, affects biofilm formation
HKOGLL_09595 HKOGLL_09595 100.0 Morganella morganii S5 yqgA Uncharacterized membrane protein YqgA, affects biofilm formation

Distribution of the homologs in the orthogroup group_3268

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3268

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q46831 9.6e-89 264 66 1 233 4 yqgA Uncharacterized protein YqgA Escherichia coli (strain K12)
P96689 4.37e-14 72 25 5 203 2 ydfK Uncharacterized membrane protein YdfK Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_03550
Feature type CDS
Gene yqgA
Product Uncharacterized membrane protein YqgA, affects biofilm formation
Location 17332 - 18027 (strand: -1)
Length 696 (nucleotides) / 231 (amino acids)

Contig

Accession ZDB_214
Length 335585 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3268
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF04474 Protein of unknown function (DUF554)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1811 Function unknown (S) S Uncharacterized membrane protein YqgA, affects biofilm formation

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07150 uncharacterized protein - -

Protein Sequence

MVTGPFINAAAVLIGGIAGAGLSHRLPERIRTSMPSVFGLASLAIGVLLIIKCANMPVMVLSVLLGAVIGELCCLENKINAVAGKIKTRLPARGGAQESFIENYVVLIFLFCVSGTGIFGAMHEGMTGDPTVLLTKAFMDFFTAMIFACSLGIAVSVIAAPMLIIQLVLAGSGALLMPFTTPAMMADFTAAGGVLLIATGLRICGIKMFAVINLLPALVLVMPLSLLWSSF

Flanking regions ( +/- flanking 50bp)

CCGGTTCCGTATAATAATGAGATTCAAATAAAAAAAAGCAGGAGTGATCTTTGGTTACCGGACCTTTTATTAATGCCGCCGCAGTATTAATTGGCGGAATTGCCGGGGCAGGGCTGAGCCACCGGCTGCCGGAACGTATCCGGACATCGATGCCCTCCGTATTCGGCCTGGCCTCGCTCGCCATCGGGGTGTTGCTGATTATAAAATGTGCCAATATGCCGGTGATGGTGTTGTCGGTGCTGCTGGGGGCGGTTATCGGTGAACTGTGTTGCCTGGAAAATAAAATTAATGCGGTGGCCGGTAAAATAAAGACCCGGCTTCCGGCACGGGGCGGGGCTCAGGAAAGTTTTATCGAAAACTATGTGGTGCTGATATTCCTGTTCTGTGTCAGCGGTACCGGGATTTTCGGGGCGATGCATGAAGGCATGACCGGTGATCCGACCGTTCTGCTGACCAAGGCTTTTATGGATTTTTTCACCGCGATGATATTTGCCTGCTCACTGGGTATTGCGGTGTCGGTTATTGCCGCACCGATGCTGATTATTCAGCTGGTACTGGCGGGCAGCGGTGCGTTATTAATGCCGTTTACCACACCGGCTATGATGGCGGACTTTACCGCAGCGGGCGGGGTATTATTAATCGCGACCGGGCTTCGGATCTGCGGTATTAAAATGTTTGCGGTGATTAACCTGCTTCCGGCACTGGTACTGGTGATGCCGCTGTCGCTGCTCTGGTCATCTTTCTGAATTATGATGTAAATCAGCCGGATAGATACAGCAGACGGTGGCAGTCTGTC