Homologs in group_3200

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02445 FBDBKF_02445 100.0 Morganella morganii S1 yjhB ADP-ribose pyrophosphatase YjhB, NUDIX family
NLDBIP_00545 NLDBIP_00545 100.0 Morganella morganii S4 yjhB ADP-ribose pyrophosphatase YjhB, NUDIX family
LHKJJB_01490 LHKJJB_01490 100.0 Morganella morganii S3 yjhB ADP-ribose pyrophosphatase YjhB, NUDIX family
HKOGLL_01530 HKOGLL_01530 100.0 Morganella morganii S5 yjhB ADP-ribose pyrophosphatase YjhB, NUDIX family

Distribution of the homologs in the orthogroup group_3200

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3200

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46351 5.68e-08 53 39 2 71 4 None Uncharacterized 45.4 kDa protein in thiaminase I 5'region Paenibacillus thiaminolyticus
P32091 8.07e-07 49 25 2 128 3 None MutT-like protein Streptomyces ambofaciens
Q5M8V2 3.13e-06 48 38 2 67 2 nudt17 Nucleoside diphosphate-linked moiety X motif 17 Xenopus tropicalis
P32090 4.65e-06 46 36 3 71 3 mutT 8-oxo-dGTP diphosphatase Proteus vulgaris
Q5PQ04 7.96e-06 47 41 1 60 2 nudt17 Nucleoside diphosphate-linked moiety X motif 17 Xenopus laevis
P32056 1.72e-05 45 26 5 136 1 gmm GDP-mannose mannosyl hydrolase Escherichia coli (strain K12)
D8KIT5 5.6e-05 44 30 3 101 1 folQ Probable DHNTP pyrophosphohydrolase Lactococcus lactis subsp. cremoris (strain NZ9000)
P0CI35 5.6e-05 44 30 3 101 3 folQ Probable DHNTP pyrophosphohydrolase Lactococcus lactis subsp. cremoris (strain MG1363)
Q4V8V2 7.92e-05 44 46 1 52 2 nudt17 Nucleoside diphosphate-linked moiety X motif 17 Danio rerio
O06972 8.38e-05 43 28 2 100 3 yvcI Uncharacterized Nudix hydrolase YvcI Bacillus subtilis (strain 168)
Q9RVK2 0.000101 43 55 1 38 1 DR_1025 Nudix hydrolase DR_1025 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
Q9CGE1 0.000103 43 40 1 55 3 folQ Probable DHNTP pyrophosphohydrolase Lactococcus lactis subsp. lactis (strain IL1403)
A4FUG7 0.000515 42 40 1 59 2 NUDT17 Nucleoside diphosphate-linked moiety X motif 17 Bos taurus
P59659 0.000678 41 38 1 54 3 mutX 8-oxo-dGTP diphosphatase Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Q7N961 0.000783 41 25 2 90 3 nudC NAD-capped RNA hydrolase NudC Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_02915
Feature type CDS
Gene yjhB
Product ADP-ribose pyrophosphatase YjhB, NUDIX family
Location 571397 - 571858 (strand: 1)
Length 462 (nucleotides) / 153 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3200
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF00293 NUDIX domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1051 Nucleotide transport and metabolism (F) F ADP-ribose pyrophosphatase YjhB, NUDIX family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03574 8-oxo-dGTP diphosphatase [EC:3.6.1.55] - -

Protein Sequence

MRSVIKHFTASGLVSDNHGRFLLHRHPKLGIWLPPGGHIEENEEPQDAVLREIHEETGLKCRIGSWDTQAQQFITPLPETGVLPLPMAILKEFIPDKKTGDHWHIDMVYWCHPLDETAVPHPDFQWMTPDEILKTDNVPQDVCGLIAMVQARR

Flanking regions ( +/- flanking 50bp)

CTCTGCCGGTGGTTCTGACCATGATCACCTGAATAACCTGAGAAAAAATAATGAGGTCTGTTATCAAACATTTTACCGCCTCCGGCCTGGTCAGTGACAACCACGGCCGTTTTCTGCTCCATCGCCATCCGAAGCTCGGTATCTGGCTGCCGCCCGGCGGGCATATTGAGGAAAATGAAGAGCCTCAGGATGCTGTTCTGCGTGAAATTCACGAAGAAACCGGACTGAAATGCCGGATTGGCAGTTGGGATACACAGGCACAGCAATTTATCACACCACTGCCGGAAACCGGCGTGCTGCCATTACCTATGGCGATCCTGAAAGAGTTTATCCCGGATAAGAAAACCGGCGACCACTGGCATATTGATATGGTGTACTGGTGCCATCCGCTGGATGAAACCGCCGTACCACATCCGGACTTTCAGTGGATGACGCCGGACGAGATCCTGAAAACGGACAATGTCCCGCAGGATGTCTGCGGCCTGATTGCTATGGTGCAGGCGCGCCGCTGAACAAAGCTTTCACCCGGCTGTCTTTTTTTTCTGTTTCAGGGCAAATGCCC