Homologs in group_620

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01975 FBDBKF_01975 100.0 Morganella morganii S1 citM Mg2+/citrate symporter
NLDBIP_01015 NLDBIP_01015 100.0 Morganella morganii S4 citM Mg2+/citrate symporter
LHKJJB_01020 LHKJJB_01020 100.0 Morganella morganii S3 citM Mg2+/citrate symporter
HKOGLL_01060 HKOGLL_01060 100.0 Morganella morganii S5 citM Mg2+/citrate symporter
F4V73_RS04320 F4V73_RS04320 89.2 Morganella psychrotolerans - citrate:proton symporter
PMI_RS11935 PMI_RS11935 75.1 Proteus mirabilis HI4320 - citrate:proton symporter

Distribution of the homologs in the orthogroup group_620

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_620

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42308 2.06e-72 237 32 4 420 1 citN Citrate transporter Bacillus subtilis (strain 168)
O05407 3.19e-72 236 31 4 427 3 yraO Uncharacterized transporter YraO Bacillus subtilis (strain 168)
P55069 1.52e-61 209 30 3 419 1 citM Mg(2+)/citrate complex secondary transporter Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_02445
Feature type CDS
Gene citM
Product Mg2+/citrate symporter
Location 469410 - 470723 (strand: -1)
Length 1314 (nucleotides) / 437 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_620
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03600 Citrate transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2851 Energy production and conversion (C) C Mg2+/citrate symporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03300 citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family - -

Protein Sequence

MLTLIGLLIIISIVVLLMTGKTSPVIAMSVIPLLGALLAGYSLPEITEFFDYGIRKVASVAVMFLFAILFFSIMKDLHIFNPFIRLMIGLTRGNVVIVAMVTALVAAVVHLDGSGAATFLIIIPAFLPIYRRLGMSPYLMLLLMCMSMGVMNMVPWGGPLGRASAVTGISASVLWQPLIPVQIIGITASVLVAALFGLREKRRIARAAQYGTTPYEQDSLLELYDEADKEHGTEKPQRFLINISLILLAILSLALGWLAAPYIFMLALSAALIVNYPKPKDQVAVINHHAPQALSMAAIILSAGVFLGIMDKGGMLESVAKDLLIIIPGHMAEQFHIIIGMIGVPLDIFTSTDAYYFALLPIVRDVVASAGIPPADVVYAMAIGNNAGTFVSPFSPAVWLAVGIAGVDMGRHLRYSFFWIWLFSFIALAAGWFLGLF

Flanking regions ( +/- flanking 50bp)

ATCTCTTTCAGTAACATCAGAAAATAACTATTCCGGATAAGGATCATCTGATGCTGACACTGATTGGACTGCTGATCATCATTTCTATTGTCGTTCTGCTGATGACAGGAAAAACCAGCCCTGTAATTGCCATGTCTGTTATTCCCCTGCTCGGCGCCCTGCTGGCCGGCTATTCCCTGCCTGAAATCACTGAATTTTTTGATTACGGCATCAGGAAAGTGGCCAGTGTCGCGGTGATGTTCCTGTTTGCCATTCTGTTTTTCAGCATTATGAAAGACCTGCATATCTTCAATCCGTTTATCCGTCTGATGATCGGGCTGACCCGGGGAAATGTGGTGATTGTGGCGATGGTCACAGCTCTGGTGGCAGCCGTTGTGCATCTCGACGGTTCCGGTGCGGCAACCTTTCTGATTATTATCCCGGCATTTCTGCCTATCTACCGGCGTCTGGGTATGAGCCCGTATCTGATGCTGCTGCTGATGTGTATGAGTATGGGGGTGATGAATATGGTGCCGTGGGGCGGACCGCTCGGCCGCGCTTCTGCTGTGACCGGTATTTCCGCTTCAGTCCTGTGGCAGCCGCTGATCCCGGTACAAATCATCGGTATTACCGCATCGGTGCTGGTTGCCGCGCTGTTTGGTCTGCGGGAGAAACGCCGGATCGCCCGGGCGGCACAATACGGCACCACACCGTATGAGCAGGATTCGCTTCTTGAATTGTATGATGAGGCGGATAAAGAACACGGTACGGAAAAACCACAGCGCTTTCTGATTAATATCTCGCTGATCCTGCTGGCTATCCTCAGTCTGGCACTGGGGTGGCTCGCGGCACCGTATATCTTTATGCTGGCGCTCTCCGCCGCTCTCATTGTCAATTACCCGAAACCGAAAGATCAGGTGGCGGTGATTAACCATCATGCCCCGCAGGCGTTATCTATGGCAGCAATTATCCTTTCCGCCGGGGTATTCCTGGGGATTATGGATAAAGGCGGGATGCTGGAGTCAGTGGCGAAGGATCTGCTGATTATTATTCCGGGACATATGGCGGAGCAGTTCCACATTATTATCGGGATGATTGGTGTGCCGCTGGATATCTTTACCAGTACCGATGCCTATTACTTTGCCCTGCTGCCGATTGTCCGTGACGTGGTGGCATCCGCCGGTATTCCGCCTGCAGATGTGGTGTATGCCATGGCTATCGGTAATAACGCCGGTACCTTTGTCAGCCCGTTCTCACCGGCTGTCTGGCTGGCGGTGGGGATTGCCGGGGTGGATATGGGGCGGCACCTGCGCTACTCCTTCTTCTGGATCTGGCTGTTCAGCTTTATCGCGCTGGCGGCAGGCTGGTTCCTCGGGCTGTTCTGAGCCGGATACAAAAAGCCCGGTCATCTGACCGGGCCTGAAAAATAATATGT