Homologs in group_2248

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17210 FBDBKF_17210 100.0 Morganella morganii S1 osmB osmotically-inducible lipoprotein OsmB
NLDBIP_01780 NLDBIP_01780 100.0 Morganella morganii S4 osmB osmotically-inducible lipoprotein OsmB
LHKJJB_00255 LHKJJB_00255 100.0 Morganella morganii S3 osmB osmotically-inducible lipoprotein OsmB
HKOGLL_00295 HKOGLL_00295 100.0 Morganella morganii S5 osmB osmotically-inducible lipoprotein OsmB
F4V73_RS05970 F4V73_RS05970 86.1 Morganella psychrotolerans osmB osmotically-inducible lipoprotein OsmB
PMI_RS06210 PMI_RS06210 63.9 Proteus mirabilis HI4320 osmB osmotically-inducible lipoprotein OsmB

Distribution of the homologs in the orthogroup group_2248

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2248

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37723 6.04e-09 50 61 0 72 2 osmB Osmotically-inducible lipoprotein B Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0ADB0 8.37e-09 50 64 0 67 3 osmB Osmotically-inducible lipoprotein B Shigella flexneri
P0ADA7 8.37e-09 50 64 0 67 2 osmB Osmotically-inducible lipoprotein B Escherichia coli (strain K12)
P0ADA8 8.37e-09 50 64 0 67 3 osmB Osmotically-inducible lipoprotein B Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADA9 8.37e-09 50 64 0 67 3 osmB Osmotically-inducible lipoprotein B Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_01680
Feature type CDS
Gene osmB
Product osmotically-inducible lipoprotein OsmB
Location 331504 - 331722 (strand: -1)
Length 219 (nucleotides) / 72 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2248
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05433 Glycine zipper 2TM domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04062 osmotically inducible lipoprotein OsmB - -

Protein Sequence

MKMNIKRVSTVTLSAVLLIAVAGCSNMSKRDRNTAIGAGVGAVGGAILTDGSALGTVGGAAIGGLIGHQVKK

Flanking regions ( +/- flanking 50bp)

TCCCGAACAGGTCTATGTTGTAACACGCCTATTGTTCAGGAGTTTATGAGATGAAAATGAATATTAAGAGAGTAAGCACAGTGACTTTATCCGCAGTCCTGCTGATTGCTGTAGCCGGTTGTTCAAATATGTCGAAACGTGACCGGAATACTGCTATCGGAGCCGGTGTCGGTGCTGTTGGTGGTGCAATCCTGACCGACGGCAGCGCACTCGGAACCGTCGGCGGTGCGGCAATCGGCGGCCTTATCGGACACCAGGTGAAAAAATAATTTCCGGAGCCGGCATACCGCCGGCTCTTTCATTCTTTCCCGGCTTTATA