Homologs in group_3144

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00205 FBDBKF_00205 100.0 Morganella morganii S1 - Winged helix-turn-helix transcriptional regulator
NLDBIP_02120 NLDBIP_02120 100.0 Morganella morganii S4 - Winged helix-turn-helix transcriptional regulator
LHKJJB_03635 LHKJJB_03635 100.0 Morganella morganii S3 - Winged helix-turn-helix transcriptional regulator
HKOGLL_03410 HKOGLL_03410 100.0 Morganella morganii S5 - Winged helix-turn-helix transcriptional regulator

Distribution of the homologs in the orthogroup group_3144

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3144

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_01340
Feature type CDS
Gene -
Product Winged helix-turn-helix transcriptional regulator
Location 275976 - 276398 (strand: 1)
Length 423 (nucleotides) / 140 (amino acids)
In genomic island GI21

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3144
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Protein Sequence

MNSEKYKLYVEIIKRCRDCTEFNNKTVSAVIGIDTRTTSIYMREMESIGCVKTVGRRVIRGYLSPVYQFDDNAVTRLRNHFLTEAMPEAAMNIISAEKIPVPKIRKHPFEDGFGRSLITEIDAMLREVCCGMPTVQQRTG

Flanking regions ( +/- flanking 50bp)

GTCAAATATCTGAAACCGACACCACGAGCAATGGTTAACAGGATGTGGCGATGAACAGCGAAAAATACAAATTGTACGTAGAGATAATCAAGCGATGCCGTGACTGCACCGAATTCAACAACAAAACAGTGTCAGCGGTCATTGGCATTGATACCAGGACAACATCCATCTACATGCGTGAGATGGAAAGTATCGGATGCGTGAAAACAGTAGGACGCCGGGTTATCCGTGGTTATCTGAGCCCGGTGTACCAGTTTGACGATAACGCTGTTACCAGGCTGAGAAATCATTTCCTGACGGAGGCCATGCCTGAAGCGGCGATGAATATTATCTCAGCCGAAAAAATACCGGTACCAAAAATCAGAAAACATCCGTTCGAAGATGGTTTTGGCCGGTCGCTGATAACCGAAATTGACGCAATGCTGCGGGAGGTGTGCTGTGGAATGCCAACTGTGCAGCAAAGAACTGGCTGACGATGAAGTTTACGTGTGCGACCAGTGCACCAACGAATGTCCGCATCTGG