Homologs in group_489

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00845 FBDBKF_00845 100.0 Morganella morganii S1 ylaC Inner membrane protein ylaC
NLDBIP_02760 NLDBIP_02760 100.0 Morganella morganii S4 ylaC Inner membrane protein ylaC
LHKJJB_04275 LHKJJB_04275 100.0 Morganella morganii S3 ylaC Inner membrane protein ylaC
HKOGLL_02770 HKOGLL_02770 100.0 Morganella morganii S5 ylaC Inner membrane protein ylaC
F4V73_RS06835 F4V73_RS06835 82.8 Morganella psychrotolerans - YlaC family protein
PMI_RS08185 PMI_RS08185 44.5 Proteus mirabilis HI4320 - YlaC family protein

Distribution of the homologs in the orthogroup group_489

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_489

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAS2 2.84e-37 128 41 2 156 3 ylaC Inner membrane protein YlaC Shigella flexneri
P0AAS0 2.84e-37 128 41 2 156 1 ylaC Inner membrane protein YlaC Escherichia coli (strain K12)
P0AAS1 2.84e-37 128 41 2 156 3 ylaC Inner membrane protein YlaC Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_00700
Feature type CDS
Gene ylaC
Product Inner membrane protein ylaC
Location 154132 - 154641 (strand: -1)
Length 510 (nucleotides) / 169 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_489
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10777 Inner membrane protein YlaC

Protein Sequence

MDVVRTLITGALDNINQREKRDGKPRFSSHFIRTYPYLCLAMVVSYLVLGVLIYYAPYFGFYWLLGFSALFLVMAAVLLFEVRPVYRFTDIGVLDLRVCYNGEWFVSEVVPPETLAALLDHPQVSDSLKQEIRHMTETKGTVSFYDLHLMAYPEAHPEKPRSHWMKGAA

Flanking regions ( +/- flanking 50bp)

TGTTAATATAATGTATCAGAATAGTCAGCAGACCTGCGGAGGTCATTCATATGGATGTCGTCAGAACACTTATTACCGGCGCTCTTGATAATATCAACCAGCGTGAGAAACGGGACGGAAAACCCCGTTTCAGCAGTCATTTTATCCGCACCTATCCTTATTTATGTCTGGCGATGGTGGTGTCCTATCTTGTTCTGGGTGTTCTTATTTATTATGCACCCTACTTCGGCTTTTACTGGCTGCTCGGTTTCAGTGCCCTGTTCCTGGTAATGGCAGCGGTTCTGCTGTTTGAGGTCAGACCGGTTTACCGCTTTACGGATATCGGCGTGCTGGATCTGCGGGTGTGCTACAACGGCGAATGGTTTGTCAGTGAAGTTGTGCCCCCGGAAACCCTGGCGGCGTTACTTGACCACCCGCAGGTCAGTGATTCACTGAAACAGGAGATCCGCCATATGACAGAAACAAAAGGTACCGTGTCATTTTATGATCTGCATCTGATGGCGTACCCGGAAGCGCATCCGGAAAAACCGCGCTCTCACTGGATGAAAGGTGCAGCTTAAGCCACTGTTTATGCCTGTTTTTCACTCACCCGGGTTACTTGCTGAGCAAA