Homologs in group_553

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01350 FBDBKF_01350 100.0 Morganella morganii S1 tssA type VI secretion system protein TssA
NLDBIP_03265 NLDBIP_03265 100.0 Morganella morganii S4 tssA type VI secretion system protein TssA
LHKJJB_04780 LHKJJB_04780 100.0 Morganella morganii S3 tssA type VI secretion system protein TssA
HKOGLL_02265 HKOGLL_02265 100.0 Morganella morganii S5 tssA type VI secretion system protein TssA
F4V73_RS02320 F4V73_RS02320 66.3 Morganella psychrotolerans tssA type VI secretion system protein TssA
PMI_RS03625 PMI_RS03625 48.0 Proteus mirabilis HI4320 tssA type VI secretion system protein TssA

Distribution of the homologs in the orthogroup group_553

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_553

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_00195
Feature type CDS
Gene tssA
Product type VI secretion system protein TssA
Location 44927 - 46384 (strand: -1)
Length 1458 (nucleotides) / 485 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_553
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06812 ImpA, N-terminal, type VI secretion system
PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11910 type VI secretion system protein VasJ - -

Protein Sequence

MIATRFNWSEQLLAPLDPGQISSAVSDSNPDWEYIDSEMVKFGSLTHASLDIEAIQSRILTLLSATTKDFRLVVHLLRTLQHAGNAEEVALGAQLFSLFCRQFWHNCYPENIRLKVRLTQQVLQRFELAQDNFTRQATTAQRDDVLGDFAGLAQFWSEDHQALSQKLDDLSRGYRRIENSTPDDITASAHPAADTAKTGPSADPAPRALPAADTETDTDFPAADIDSGNDRTRKTALLNAADALCRRAPENAIGYQLRRYAIWHTIQSVPSADAAGKTPLAAVSADRVTDYRKQLTQADPVLLADIEQSLSLAPYWLDGHYLAAQAAQQLGLDAVAQAIRRCASEFTARLPQLTTLSFSDKTPFADADTLAWLNTTDAAATGISTGGIQADTDEITRCCRENGLDAALQKIDDAINRAEQLRDRVCLQLLAASLFEQSGMTGLAQAQYQQLYDIVSRSTVTQWEPALLQQLTGKLPESDFRRNNV

Flanking regions ( +/- flanking 50bp)

CTGACAGAAAGTATCAAACCTTTACGTGCGGCCTGCCGCTGGTGAATAGCATGATAGCGACACGTTTTAACTGGTCTGAACAACTGCTCGCCCCGCTTGACCCCGGGCAGATAAGCAGTGCTGTCAGTGACAGTAACCCGGACTGGGAATATATCGACAGCGAAATGGTTAAATTCGGCTCCCTGACTCACGCCTCACTGGATATTGAGGCTATTCAGTCGCGGATCCTGACACTGCTCTCCGCCACCACAAAAGATTTCCGCCTCGTGGTGCATCTGCTGCGAACCCTGCAGCATGCCGGAAATGCAGAGGAAGTCGCGCTCGGCGCACAACTGTTTTCTCTGTTCTGCCGTCAGTTCTGGCACAACTGTTATCCTGAAAATATCAGGCTCAAAGTCCGCCTGACACAACAGGTTTTACAGCGCTTTGAGCTGGCACAGGATAATTTCACCCGTCAGGCCACCACCGCACAGCGCGATGATGTCCTCGGGGACTTTGCCGGACTGGCACAGTTCTGGAGTGAAGACCATCAGGCACTGTCACAAAAACTGGATGACCTGAGCCGGGGTTACCGCCGCATTGAAAACAGCACGCCGGATGATATCACTGCCTCCGCACATCCGGCGGCGGATACAGCAAAAACCGGGCCGTCTGCCGATCCGGCACCGCGTGCTCTGCCTGCCGCAGATACAGAAACAGACACGGACTTTCCGGCTGCAGACATTGACAGCGGCAATGACCGCACCCGCAAAACAGCCCTGCTGAATGCCGCAGATGCCCTTTGCCGCCGCGCACCTGAAAATGCCATCGGCTATCAGCTGCGCCGTTATGCCATCTGGCACACCATTCAGTCAGTACCGTCCGCCGATGCCGCCGGTAAAACCCCGCTGGCGGCTGTTTCCGCTGACCGGGTTACCGATTACCGCAAACAGCTGACACAGGCTGACCCGGTATTACTGGCTGATATTGAACAGAGTCTCAGCCTCGCCCCTTACTGGCTGGACGGCCATTATCTGGCCGCACAGGCCGCACAACAGCTGGGGCTGGATGCGGTTGCACAGGCTATCCGCCGCTGTGCATCGGAATTTACCGCCCGCCTGCCGCAACTGACCACACTCAGTTTTTCCGATAAAACGCCGTTCGCCGATGCTGACACCCTCGCCTGGCTGAACACCACAGACGCCGCCGCCACCGGTATCAGTACCGGCGGTATACAGGCCGATACGGATGAGATAACCCGCTGCTGCCGGGAAAACGGTCTGGATGCGGCACTGCAAAAAATTGATGACGCCATAAACCGGGCTGAACAGCTGCGTGATCGCGTCTGCCTGCAACTTCTGGCCGCCTCTCTGTTTGAACAGTCCGGCATGACGGGGCTCGCTCAGGCTCAGTATCAGCAACTATATGACATCGTATCACGCAGCACAGTAACGCAGTGGGAACCCGCTTTACTGCAACAGCTTACCGGAAAGCTTCCGGAGTCCGATTTCAGAAGGAATAACGTTTAATGAAAAAACCATCCTTATCATCCGTGAATGCACAGGGTCTGATCAGAAAA