VFG049129


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG049129, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein acriflavine resistance protein A
VF ID VF0568
Category Antimicrobial activity/Competitive advantage
Protein ID YP_005225489
Function May mediate resistance against host-derived antimicrobial peptides; associated with antibiotic resistance
Vf_category_id VFC0325

Occurence in the database

VFG049129 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_166 FBDBKF_15970 46728 47924 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S1
1 group_166 EHELCC_18575 4162 5358 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S2
2 group_166 NLDBIP_17405 34167 35363 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S4
3 group_166 LHKJJB_17255 20825 22021 1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S3
4 group_166 HKOGLL_17140 34167 35363 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S5
5 group_166 F4V73_RS16340 82431 83624 1 efflux RND transporter periplasmic adaptor subunit Morganella psychrotolerans
6 group_166 PMI_RS00640 165050 166240 -1 efflux RND transporter periplasmic adaptor subunit Proteus mirabilis HI4320