VFG044234


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Virulence factor VFG044234
Protein list: lists the 6 occurences of the Virulence factor within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Virulence factor of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factor has been clustered.
Orthogroups are shown in red if they are annotated with that particular Virulence factor in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Virulence factor prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factor.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factor prediction.

Description

Protein histidine decarboxylase
VF ID VF0936
Category Nutritional/Metabolic factor
Protein ID WP_011533709
Vf_category_id VFC0272

Occurence in the database

VFG044234 is associated with 6 different proteins
The 6 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2822 FBDBKF_09155 59235 60371 1 hdc histidine decarboxylase Morganella morganii S1
1 group_2822 EHELCC_10255 85733 86869 -1 hdc histidine decarboxylase Morganella morganii S2
2 group_2822 NLDBIP_10600 64004 65140 -1 hdc histidine decarboxylase Morganella morganii S4
3 group_2822 LHKJJB_10755 126388 127524 1 hdc histidine decarboxylase Morganella morganii S3
4 group_2822 HKOGLL_13815 59689 60825 1 hdc histidine decarboxylase Morganella morganii S5
5 group_2822 F4V73_RS10795 291537 292673 -1 histidine decarboxylase Morganella psychrotolerans