VFG012575


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG012575, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein iron/manganese ABC transporter substrate-binding protein SitA
VF ID VF1116
Category Nutritional/Metabolic factor
Protein ID WP_000949004
Vf_category_id VFC0272

Occurence in the database

VFG012575 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1813 FBDBKF_13445 67685 68614 1 znuA ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA Morganella morganii S1
1 group_1813 EHELCC_08650 206577 207506 -1 znuA ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA Morganella morganii S2
2 group_1813 NLDBIP_08975 206577 207506 -1 znuA ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA Morganella morganii S4
3 group_1813 LHKJJB_05290 49653 50582 1 znuA ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA Morganella morganii S3
4 group_1813 HKOGLL_05625 191168 192097 -1 znuA ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA Morganella morganii S5