VFG002669


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG002669, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein flagellar biosynthetic protein FliR
VF ID VF0394
Category Motility
Protein ID WP_002211130
Function Required for efficient cellular invasion; YplA, a phospholipase is secreted by this type III flagellum secretion system. YplA is required for survival of Y. enterocolitica in the Peyer's patches and for stimulation of the acute inflammatory response of the host to the infection; contributed to the initiation of biofilm formation
Vf_category_id VFC0204

Occurence in the database

VFG002669 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_462 FBDBKF_00650 107346 108131 1 fliR flagellar biosynthetic protein FliR Morganella morganii S1
1 group_462 EHELCC_00895 200737 201522 -1 fliR flagellar biosynthetic protein FliR Morganella morganii S2
2 group_462 NLDBIP_02565 478614 479399 1 fliR flagellar biosynthetic protein FliR Morganella morganii S4
3 group_462 LHKJJB_04080 85855 86640 1 fliR flagellar biosynthetic protein FliR Morganella morganii S3
4 group_462 HKOGLL_02965 200942 201727 -1 fliR flagellar biosynthetic protein FliR Morganella morganii S5
5 group_462 PMI_RS08020 1753555 1754337 1 fliR flagellar biosynthetic protein FliR Proteus mirabilis HI4320