PF22780


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF22780, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF22780
Description HI0933-like protein barrel and H2TH domain

Occurence in the database

PF22780 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1586 FBDBKF_10345 23559 24761 1 yhiN putative flavoprotein YhiN Morganella morganii S1
1 group_1586 EHELCC_14680 23549 24751 1 yhiN putative flavoprotein YhiN Morganella morganii S2
2 group_1586 NLDBIP_14510 23549 24751 1 yhiN putative flavoprotein YhiN Morganella morganii S4
3 group_1586 LHKJJB_14835 116975 118177 -1 yhiN putative flavoprotein YhiN Morganella morganii S3
4 group_1586 HKOGLL_13455 116975 118177 -1 yhiN putative flavoprotein YhiN Morganella morganii S5
5 group_1586 F4V73_RS14045 19555 20760 1 NAD(P)/FAD-dependent oxidoreductase Morganella psychrotolerans
6 group_1586 PMI_RS14895 3306380 3307585 1 NAD(P)/FAD-dependent oxidoreductase Proteus mirabilis HI4320