PF22759


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF22759, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF22759
Description Baseplate hub gp41

Occurence in the database

PF22759 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_354 FBDBKF_12715 54339 55154 -1 Phage-related protein Morganella morganii S1
1 group_354 FBDBKF_17260 30960 31778 -1 Phage tail protein Morganella morganii S1
2 group_354 EHELCC_01630 323726 324541 1 Phage tail protein Morganella morganii S2
3 group_354 NLDBIP_01830 355595 356410 -1 Phage tail protein Morganella morganii S4
4 group_354 LHKJJB_00205 36275 37090 1 Phage tail protein Morganella morganii S3
5 group_354 HKOGLL_00245 41786 42601 1 Phage tail protein Morganella morganii S5
6 group_354 F4V73_RS06055 1282904 1283719 -1 hypothetical protein Morganella psychrotolerans
7 group_354 PMI_RS08395 1832427 1833239 -1 hypothetical protein Proteus mirabilis HI4320