PF22667


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF22667, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF22667
Description Lon protease AAA+ ATPase lid domain

Occurence in the database

PF22667 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2113 FBDBKF_15885 26863 29220 1 lon endopeptidase La Morganella morganii S1
1 group_2113 EHELCC_18485 14302 16659 1 lon endopeptidase La Morganella morganii S2
2 group_2113 NLDBIP_17320 14302 16659 1 lon endopeptidase La Morganella morganii S4
3 group_2113 LHKJJB_17340 39529 41886 -1 lon endopeptidase La Morganella morganii S3
4 group_2113 HKOGLL_17055 14302 16659 1 lon endopeptidase La Morganella morganii S5
5 group_2113 F4V73_RS16430 102410 104767 -1 lon endopeptidase La Morganella psychrotolerans
6 group_2113 PMI_RS00565 145300 147654 1 lon endopeptidase La Proteus mirabilis HI4320