PF22421


Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF22421
Protein list: lists the 7 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF22421
Description Tyrosine--tRNA ligase SYY-like C-terminal domain

Occurence in the database

PF22421 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1081 FBDBKF_05665 140215 141489 -1 tyrS tyrosine--tRNA ligase Morganella morganii S1
1 group_1081 EHELCC_11925 40005 41279 1 tyrS tyrosine--tRNA ligase Morganella morganii S2
2 group_1081 NLDBIP_12265 39960 41234 1 tyrS tyrosine--tRNA ligase Morganella morganii S4
3 group_1081 LHKJJB_12125 40005 41279 1 tyrS tyrosine--tRNA ligase Morganella morganii S3
4 group_1081 HKOGLL_10740 40005 41279 1 tyrS tyrosine--tRNA ligase Morganella morganii S5
5 group_1081 F4V73_RS03640 773471 774745 1 tyrS tyrosine--tRNA ligase Morganella psychrotolerans
6 group_1081 PMI_RS06695 1464156 1465430 -1 tyrS tyrosine--tRNA ligase Proteus mirabilis HI4320