PF21390


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF21390, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF21390
Description Thiazolinyl imine reductase Irp3-like, C-terminal

Occurence in the database

PF21390 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3017 FBDBKF_17890 16628 17716 1 pchG Oxidoreductase (NAD-binding), involved in siderophore biosynthesis Morganella morganii S1
1 group_3017 EHELCC_06445 18660 19748 -1 pchG Oxidoreductase (NAD-binding), involved in siderophore biosynthesis Morganella morganii S2
2 group_3017 NLDBIP_06765 18533 19621 -1 pchG Oxidoreductase (NAD-binding), involved in siderophore biosynthesis Morganella morganii S4
3 group_3017 LHKJJB_18895 16636 17724 1 pchG Oxidoreductase (NAD-binding), involved in siderophore biosynthesis Morganella morganii S3
4 group_3017 HKOGLL_04625 250020 251108 1 pchG Oxidoreductase (NAD-binding), involved in siderophore biosynthesis Morganella morganii S5
5 group_3017 PMI_RS12845 2850279 2851367 1 Gfo/Idh/MocA family oxidoreductase Proteus mirabilis HI4320