PF20514


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF20514, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF20514
Description ROXA-like winged helix

Occurence in the database

PF20514 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_62 FBDBKF_02505 197232 198353 -1 roxA Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain Morganella morganii S1
1 group_62 FBDBKF_14585 11902 13023 1 roxA Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain Morganella morganii S1
2 group_62 EHELCC_02975 585052 586173 -1 roxA Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain Morganella morganii S2
3 group_62 EHELCC_15390 41978 43099 1 roxA Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain Morganella morganii S2
4 group_62 NLDBIP_00485 93963 95084 1 roxA Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain Morganella morganii S4
5 group_62 NLDBIP_15920 41978 43099 1 roxA Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain Morganella morganii S4
6 group_62 LHKJJB_01550 297601 298722 -1 roxA Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain Morganella morganii S3
7 group_62 LHKJJB_15920 73587 74708 -1 roxA Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain Morganella morganii S3
8 group_62 HKOGLL_01590 303112 304233 -1 roxA Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain Morganella morganii S5
9 group_62 HKOGLL_15040 72799 73920 -1 roxA Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain Morganella morganii S5
10 group_62 F4V73_RS02440 515816 516937 1 cupin domain-containing protein Morganella psychrotolerans
11 group_62 F4V73_RS07380 1540104 1541225 1 cupin domain-containing protein Morganella psychrotolerans
12 group_62 PMI_RS04340 974872 975993 -1 cupin domain-containing protein Proteus mirabilis HI4320