PF20036


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF20036, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF20036
Description Major capsid protein 13-like

Occurence in the database

PF20036 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2458 FBDBKF_00095 16196 17176 -1 Phage protein Morganella morganii S1
1 group_2458 EHELCC_01450 291692 292672 1 Phage protein Morganella morganii S2
2 group_2458 NLDBIP_02010 387464 388444 -1 Phage protein Morganella morganii S4
3 group_2458 LHKJJB_00025 4241 5221 1 Phage protein Morganella morganii S3
4 group_2458 HKOGLL_00065 9752 10732 1 Phage protein Morganella morganii S5
5 group_2458 PMI_RS02485 551937 552890 1 major capsid protein Proteus mirabilis HI4320