PF18742


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF18742, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 5 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF18742
Description REase_DpnII-MboI

Occurence in the database

PF18742 is associated with 5 different proteins (see tab "Protein list" and "Profile")
The 5 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3590 FBDBKF_19820 9339 10214 1 Transposase Morganella morganii S1
1 group_3590 EHELCC_10545 156033 156908 1 Transposase Morganella morganii S2
2 group_3590 NLDBIP_10890 134304 135179 1 Transposase Morganella morganii S4
3 group_3590 LHKJJB_10465 56349 57224 -1 Transposase Morganella morganii S3
4 group_3590 HKOGLL_16630 56358 57233 -1 Transposase Morganella morganii S5