PF18352


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF18352, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF18352
Description Phage protein Gp138 N-terminal domain

Occurence in the database

PF18352 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_203 FBDBKF_12710 53633 54325 -1 Phage-related protein Morganella morganii S1
1 group_203 FBDBKF_17255 30251 30943 -1 Phage protein Gp138 N-terminal domain-containing protein Morganella morganii S1
2 group_203 EHELCC_01635 324558 325250 1 Phage protein Gp138 N-terminal domain-containing protein Morganella morganii S2
3 group_203 NLDBIP_01825 354886 355578 -1 Phage protein Gp138 N-terminal domain-containing protein Morganella morganii S4
4 group_203 LHKJJB_00210 37107 37799 1 Phage protein Gp138 N-terminal domain-containing protein Morganella morganii S3
5 group_203 HKOGLL_00250 42618 43310 1 Phage protein Gp138 N-terminal domain-containing protein Morganella morganii S5
6 group_203 F4V73_RS06050 1282198 1282890 -1 Gp138 family membrane-puncturing spike protein Morganella psychrotolerans
7 group_203 PMI_RS08390 1831732 1832424 -1 Gp138 family membrane-puncturing spike protein Proteus mirabilis HI4320