PF17900


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF17900, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF17900
Description Peptidase M1 N-terminal domain

Occurence in the database

PF17900 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1249 FBDBKF_07270 133370 135988 1 pepN aminopeptidase N Morganella morganii S1
1 group_1249 EHELCC_03700 50198 52816 -1 pepN aminopeptidase N Morganella morganii S2
2 group_1249 NLDBIP_03700 49994 52612 -1 pepN aminopeptidase N Morganella morganii S4
3 group_1249 LHKJJB_09530 50108 52726 -1 pepN aminopeptidase N Morganella morganii S3
4 group_1249 HKOGLL_09445 138326 140944 1 pepN aminopeptidase N Morganella morganii S5
5 group_1249 F4V73_RS01455 321402 324020 1 pepN aminopeptidase N Morganella psychrotolerans
6 group_1249 PMI_RS03780 853418 856033 1 pepN aminopeptidase N Proteus mirabilis HI4320