PF17760


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF17760, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF17760
Description UvrA interaction domain

Occurence in the database

PF17760 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2226 FBDBKF_17030 36481 39315 1 uvrA excinuclease ABC subunit UvrA Morganella morganii S1
1 group_2226 EHELCC_16560 29195 32029 -1 uvrA excinuclease ABC subunit UvrA Morganella morganii S2
2 group_2226 NLDBIP_16770 29195 32029 -1 uvrA excinuclease ABC subunit UvrA Morganella morganii S4
3 group_2226 LHKJJB_16700 36481 39315 1 uvrA excinuclease ABC subunit UvrA Morganella morganii S3
4 group_2226 HKOGLL_17665 36481 39315 1 uvrA excinuclease ABC subunit UvrA Morganella morganii S5
5 group_2226 F4V73_RS18510 37389 40223 1 uvrA excinuclease ABC subunit UvrA Morganella psychrotolerans
6 group_2226 PMI_RS13535 3001171 3004005 -1 uvrA excinuclease ABC subunit UvrA Proteus mirabilis HI4320