PF17656


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF17656, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF17656
Description FlgA N-terminal domain

Occurence in the database

PF17656 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_474 FBDBKF_00720 120498 121154 1 flgA Flagellar basal body P-ring formation protein FlgA Morganella morganii S1
1 group_474 EHELCC_00825 187714 188370 -1 flgA Flagellar basal body P-ring formation protein FlgA Morganella morganii S2
2 group_474 NLDBIP_02635 491766 492422 1 flgA Flagellar basal body P-ring formation protein FlgA Morganella morganii S4
3 group_474 LHKJJB_04150 99007 99663 1 flgA Flagellar basal body P-ring formation protein FlgA Morganella morganii S3
4 group_474 HKOGLL_02895 187919 188575 -1 flgA Flagellar basal body P-ring formation protein FlgA Morganella morganii S5
5 group_474 F4V73_RS06730 1397423 1398079 1 flgA flagellar basal body P-ring formation chaperone FlgA Morganella psychrotolerans
6 group_474 PMI_RS08080 1764963 1765619 1 flgA flagellar basal body P-ring formation chaperone FlgA Proteus mirabilis HI4320