PF16463


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF16463, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF16463
Description Phage tail tube protein family

Occurence in the database

PF16463 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_170 FBDBKF_18595 9507 9983 -1 Phage tail protein Morganella morganii S1
1 group_170 FBDBKF_19370 8175 8657 -1 Phage tail protein Morganella morganii S1
2 group_170 EHELCC_15170 9507 9983 -1 Phage tail protein Morganella morganii S2
3 group_170 EHELCC_19290 4746 5228 1 Phage tail protein Morganella morganii S2
4 group_170 NLDBIP_15700 9507 9983 -1 Phage tail protein Morganella morganii S4
5 group_170 NLDBIP_19420 4746 5228 1 Phage tail protein Morganella morganii S4
6 group_170 LHKJJB_16140 106703 107179 1 Phage tail protein Morganella morganii S3
7 group_170 LHKJJB_19385 8175 8657 -1 Phage tail protein Morganella morganii S3
8 group_170 HKOGLL_15260 105915 106391 1 Phage tail protein Morganella morganii S5
9 group_170 HKOGLL_19225 4746 5228 1 Phage tail protein Morganella morganii S5