PF16168


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF16168, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF16168
Description Adhesin of bacterial autotransporter system, probable stalk

Occurence in the database

PF16168 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2893 FBDBKF_12320 126078 128603 1 aidA Autotransporter adhesin AidA Morganella morganii S1
1 group_2914 FBDBKF_13675 6256 9027 1 aidA Autotransporter adhesin AidA Morganella morganii S1
2 group_2914 EHELCC_11345 91132 93903 1 aidA Autotransporter adhesin AidA Morganella morganii S2
3 group_2893 EHELCC_13985 6102 8627 -1 aidA Autotransporter adhesin AidA Morganella morganii S2
4 group_2914 NLDBIP_11690 91132 93903 1 aidA Autotransporter adhesin AidA Morganella morganii S4
5 group_2893 NLDBIP_15080 10039 12564 -1 aidA Autotransporter adhesin AidA Morganella morganii S4
6 group_2914 LHKJJB_11550 91132 93903 1 aidA Autotransporter adhesin AidA Morganella morganii S3
7 group_2893 LHKJJB_15530 126078 128603 1 aidA Autotransporter adhesin AidA Morganella morganii S3
8 group_2914 HKOGLL_10160 91132 93903 1 aidA Autotransporter adhesin AidA Morganella morganii S5
9 group_2893 HKOGLL_14650 112741 115266 1 aidA Autotransporter adhesin AidA Morganella morganii S5