PF13989


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13989, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13989
Description YejG-like protein

Occurence in the database

PF13989 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1983 FBDBKF_14875 75422 75766 -1 YejG-like protein Morganella morganii S1
1 group_1983 EHELCC_15680 105498 105842 -1 YejG-like protein Morganella morganii S2
2 group_1983 NLDBIP_16210 105498 105842 -1 YejG-like protein Morganella morganii S4
3 group_1983 LHKJJB_15630 10844 11188 1 YejG-like protein Morganella morganii S3
4 group_1983 HKOGLL_14750 10056 10400 1 YejG-like protein Morganella morganii S5
5 group_1983 F4V73_RS07675 1604995 1605339 -1 hypothetical protein Morganella psychrotolerans
6 group_1983 PMI_RS04075 913019 913366 1 YejG family protein Proteus mirabilis HI4320