PF13941


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13941, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13941
Description MutL protein

Occurence in the database

PF13941 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2728 FBDBKF_07470 5794 7185 1 glmL methylaspartate mutase accessory protein GlmL Morganella morganii S1
1 group_2728 EHELCC_17140 33444 34835 1 glmL methylaspartate mutase accessory protein GlmL Morganella morganii S2
2 group_2728 NLDBIP_13745 863 2254 1 glmL methylaspartate mutase accessory protein GlmL Morganella morganii S4
3 group_2728 LHKJJB_09105 157495 158886 -1 glmL methylaspartate mutase accessory protein GlmL Morganella morganii S3
4 group_2728 HKOGLL_08655 157495 158886 -1 glmL methylaspartate mutase accessory protein GlmL Morganella morganii S5
5 group_2728 F4V73_RS13645 364670 366061 -1 glmL methylaspartate mutase accessory protein GlmL Morganella psychrotolerans