PF13600


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13600, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13600
Description N-terminal domain of unknown function (DUF4140)

Occurence in the database

PF13600 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2762 FBDBKF_07745 67655 69283 1 muiA Mucoidy inhibitor MuiA family protein Morganella morganii S1
1 group_2762 EHELCC_13575 41849 43477 1 muiA Mucoidy inhibitor MuiA family protein Morganella morganii S2
2 group_2762 NLDBIP_14020 62724 64352 1 muiA Mucoidy inhibitor MuiA family protein Morganella morganii S4
3 group_2762 LHKJJB_08830 95397 97025 -1 muiA Mucoidy inhibitor MuiA family protein Morganella morganii S3
4 group_2762 HKOGLL_08380 95397 97025 -1 muiA Mucoidy inhibitor MuiA family protein Morganella morganii S5
5 group_2762 F4V73_RS13335 296810 298432 -1 DUF4139 domain-containing protein Morganella psychrotolerans