PF13549


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13549, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13549
Description ATP-grasp domain

Occurence in the database

PF13549 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1574 FBDBKF_10205 134422 137079 1 rimL Protein N-acetyltransferase, RimJ/RimL family Morganella morganii S1
1 group_1574 EHELCC_05005 326387 329044 1 rimL Protein N-acetyltransferase, RimJ/RimL family Morganella morganii S2
2 group_1574 NLDBIP_05005 326183 328840 1 rimL Protein N-acetyltransferase, RimJ/RimL family Morganella morganii S4
3 group_1574 LHKJJB_13625 6538 9195 -1 rimL Protein N-acetyltransferase, RimJ/RimL family Morganella morganii S3
4 group_1574 HKOGLL_12910 135203 137860 1 rimL Protein N-acetyltransferase, RimJ/RimL family Morganella morganii S5
5 group_1574 F4V73_RS00125 32897 35545 -1 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase Morganella psychrotolerans
6 group_1574 PMI_RS01960 460731 463391 -1 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase Proteus mirabilis HI4320