PF13521


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13521, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 9 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13521
Description AAA domain

Occurence in the database

PF13521 is associated with 9 different proteins (see tab "Protein list" and "Profile")
The 9 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1151 FBDBKF_06595 159974 161236 -1 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR Morganella morganii S1
1 group_1151 EHELCC_09640 160546 161808 -1 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR Morganella morganii S2
2 group_1151 NLDBIP_10020 160546 161808 -1 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR Morganella morganii S4
3 group_1151 LHKJJB_07735 55430 56692 1 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR Morganella morganii S3
4 group_1151 HKOGLL_07285 55430 56692 1 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR Morganella morganii S5
5 group_1151 F4V73_RS15350 53942 55207 1 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR Morganella psychrotolerans
6 group_4206 F4V73_RS17880 18644 19297 -1 AAA family ATPase Morganella psychrotolerans
7 group_4407 PMI_RS04830 1060393 1060953 -1 AAA family ATPase Proteus mirabilis HI4320
8 group_1151 PMI_RS12380 2744652 2745896 -1 nadR multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR Proteus mirabilis HI4320