PF13466


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13466, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13466
Description STAS domain

Occurence in the database

PF13466 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_725 FBDBKF_03195 42750 43040 -1 mlaB lipid asymmetry maintenance protein MlaB Morganella morganii S1
1 group_725 EHELCC_07340 204063 204353 1 mlaB lipid asymmetry maintenance protein MlaB Morganella morganii S2
2 group_725 NLDBIP_07665 203936 204226 1 mlaB lipid asymmetry maintenance protein MlaB Morganella morganii S4
3 group_725 LHKJJB_07200 167682 167972 1 mlaB lipid asymmetry maintenance protein MlaB Morganella morganii S3
4 group_725 HKOGLL_03730 65415 65705 -1 mlaB lipid asymmetry maintenance protein MlaB Morganella morganii S5
5 group_725 F4V73_RS11725 494090 494380 1 mlaB lipid asymmetry maintenance protein MlaB Morganella psychrotolerans
6 group_725 PMI_RS18205 3994304 3994597 1 mlaB lipid asymmetry maintenance protein MlaB Proteus mirabilis HI4320